Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2023 May 10;14:2687. doi: 10.1038/s41467-023-38183-4

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Fig. 5 — Top: Venn diagram depicting the overlap of the top 10 predicted TFs of the curated CCM and photoprotective (PhPr) genes based on a the consensus or c PHOT-specific GRN. Bottom: Network representation of the top ten TF sets of b the consensus network or d the PHOT-specific GRN (center nodes, same color code as in a) and the target genes used for prediction (left and right columns of nodes, photoprotection genes are shown in green, qE-related genes in blue, and CCM genes in red. b The plotted regulatory strength corresponds to $\log (\frac{1}{r_{consen}})$ , in d, it corresponds the GENIE3 edge weights denoting random forest importance measure. The edge width is proportional to the strength of the specific regulatory interaction. The size of the TF nodes corresponds to the sum of all plotted target gene edge weights.