Figure 4.

Diffusion pseudo-time analysis on the HCA and HCL datasets

(A) The diffusion map of HCA dataset.

(B) Hematopoietic stem cells (HSCs) to erythroid cells or dendritic cells (DCs) and monocytes.

(C) Naive T cells to cytotoxic T cells and nature killer (NK) cells.

(D) Pro-B cells to plasma cells.

(E–G) Cell state signatures for progenitor signaling, naive signaling and cytotoxic signaling.

(H–K) The diffusion map of HCL dataset and its main branches. Token score is the norm of the learned token features extracted from tGPT.