Table 1.
Assembly and annotation statistics of the 13 tomato genomes
| Accession | Assembly size (Mb) | Percentage of anchoring (%) | Contig N50 (kb) | No. of predicted genes | Repeats (%) | BUSCO (%) |
|---|---|---|---|---|---|---|
| S. lycopersicoides (LA2951) | 1,200 | 92.23 | 579 | 32,295 | 71.81 | 90.1 |
| S. habrochaites (LA1777) | 960 | 86.07 | 546 | 32,386 | 69.05 | 92.0 |
| S. pennellii (LA716)a | 990 | 93.62 | 46 | 44,965 | 64.82 | 96.3 |
| S. chilense (LA1969) | 917 | 88.11 | 425 | 34,375 | 73.70 | 94.9 |
| S. peruvianum (LA0446) | 867 | 91.90 | 678 | 31,877 | 73.83 | 94.9 |
| S. corneliomulleri (LA1331) | 877 | 88.60 | 449 | 31,692 | 74.49 | 94.2 |
| S. neorickii (LA0247) | 778 | 94.07 | 2,079 | 32,831 | 72.74 | 93.1 |
| S. chmielewskii (LA1028) | 770 | 95.44 | 2,002 | 31,613 | 72.26 | 94.4 |
| S. pimpinellifolium (LA1547) | 803 | 94.78 | 3,691 | 33,427 | 72.77 | 93.1 |
| S. galapagense (LA0436) | 802 | 99.56 | 15,538 | 32,773 | 71.45 | 96.7 |
| S. lycopersicum var. cerasiforme (LA1464) | 778 | 94.68 | 2,513 | 32,941 | 73.50 | 96.7 |
| S. lycopersicum var. lycopersicum (M82) | 881 | 76.83 | 600 | 31,773 | 64.31 | 93.5 |
| S. lycopersicum var. lycopersicum (Heinz 1706)a | 828 | 97.48 | 6,008 | 35,768 | 63.46 | 96.4 |
aGenomes reported in previous studies.