Cancer cell lines |
HEK293(T), K562, COLO320, SW1463, HCC2998, HTC116, HAP1, Hep2G |
Chromosomal truncations, translocations, kilobase and megabase deletions, insertions, complex insertions and deletions |
(Boutin et al. 2021; Cullot et al. 2019; Geng et al. 2022; Liu et al. 2021; Przewrocka et al. 2020; Rayner et al. 2019; Xin et al. 2022; Yin et al. 2019, 2022; Yoo et al. 2022; Zhang et al. 2021) |
Primary cells |
hTERT-fibroblasts, hTERT-RPE1 |
Kilobase deletions, insertions and rearrangements, chromosomal truncations, micro-nucleation and chromothripsis |
(Cullot et al. 2019; Kosicki et al. 2018; Leibowitz et al. 2021) |
|
Fibroblasts |
Kilobase and megabase deletions, complex insertions and deletions, micro-nucleation |
(Cullot et al. 2019; Leibowitz et al. 2021) |
|
T-cells |
Kilobase deletions, copy-neutral loss of heterozygosity, translocations |
(Wen et al. 2021; Yin et al. 2022) |
|
iPSCs |
Kilobase deletions, copy-neutral loss of heterozygosity, insertions |
(Simkin et al. 2022; Weisheit et al. 2020; Wen et al. 2021) |
|
HSPCs |
Kilobase deletions, insertions, copy-neutral loss of heterozygosity, translocations, micro-nucleation |
(Boutin et al. 2021; Leibowitz et al. 2021; Turchiano et al. 2021; Wen et al. 2021) |
Embryonic cells |
ESCs |
Kilobase and megabase deletions, chromosome loss, copy-neutral loss of heterozygosity |
(Bi et al. 2020) |
|
Zygotes/Embryos |
Kilobase deletions, truncations, copy-neutral loss of heterozygosity, chromosome loss |
(Alanis-Lobato et al. 2021; Zuccaro et al. 2020) |