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. 2023 Apr 24;142(6):705–720. doi: 10.1007/s00439-023-02561-1

Table 1.

Summary of papers that have identified SVs in human cells

Cell category Cell line(s) or type(s) Genotoxicity type References
Cancer cell lines HEK293(T), K562, COLO320, SW1463, HCC2998, HTC116, HAP1, Hep2G Chromosomal truncations, translocations, kilobase and megabase deletions, insertions, complex insertions and deletions (Boutin et al. 2021; Cullot et al. 2019; Geng et al. 2022; Liu et al. 2021; Przewrocka et al. 2020; Rayner et al. 2019; Xin et al. 2022; Yin et al. 2019, 2022; Yoo et al. 2022; Zhang et al. 2021)
Primary cells hTERT-fibroblasts, hTERT-RPE1 Kilobase deletions, insertions and rearrangements, chromosomal truncations, micro-nucleation and chromothripsis (Cullot et al. 2019; Kosicki et al. 2018; Leibowitz et al. 2021)
Fibroblasts Kilobase and megabase deletions, complex insertions and deletions, micro-nucleation (Cullot et al. 2019; Leibowitz et al. 2021)
T-cells Kilobase deletions, copy-neutral loss of heterozygosity, translocations (Wen et al. 2021; Yin et al. 2022)
iPSCs Kilobase deletions, copy-neutral loss of heterozygosity, insertions (Simkin et al. 2022; Weisheit et al. 2020; Wen et al. 2021)
HSPCs Kilobase deletions, insertions, copy-neutral loss of heterozygosity, translocations, micro-nucleation (Boutin et al. 2021; Leibowitz et al. 2021; Turchiano et al. 2021; Wen et al. 2021)
Embryonic cells ESCs Kilobase and megabase deletions, chromosome loss, copy-neutral loss of heterozygosity (Bi et al. 2020)
Zygotes/Embryos Kilobase deletions, truncations, copy-neutral loss of heterozygosity, chromosome loss (Alanis-Lobato et al. 2021; Zuccaro et al. 2020)