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. 2023 May 2;14:1146566. doi: 10.3389/fmicb.2023.1146566

TABLE 4.

Information about the eps gene clusters and homologous sequences of Lp. plantarum MC5.

Locus tag Sequence length of AA Gene name Gene direction Gene function GenBank ID Homology (%)
eps genes cluster 1
OOD38_1002 309 mbp + Integral membrane protein MCG0749228.1 99.68
OOD38_1003 238 GLPF + Glycerol uptake facilitator protein KRO27638.1 96.49
OOD38_1004 372 glf + UDP-galactopyranose mutase WP_063490764.1 99.73
OOD38_1005 217 epsC + Polysaccharide biosynthesis protein MCG0678676.1 37.91
OOD38_1006 194 epsD + CpsD family tyrosine-protein kinase WP_181589845.1 31.34
OOD38_1007 371 ltsh + Class A beta-lactamase-related serine hydrolase MCT3250941.1 99.73
OOD38_1008 244 eps1E + Lipopolysaccharide biosynthesis glycosyltransferase KRN47847.1 60.16
OOD38_1009 298 GTF1 + Glycosyltransferase WP_195631017.1 99.66
OOD38_1010 354 GTF2 + Glycosyltransferase WP_063490758.1 99.72
OOD38_1011 332 csbp + Capsular biosynthesis protein MPQ37623.1 55.45
OOD38_1012 365 epsG + Transmembrane protein epsG MBP5842394.1 99.45
OOD38_1013 297 GTF3 + Glycosyltransferase AUV72009.1 44.37
OOD38_1014 473 wzx1 + Flippase WP_260203456.1 78.30
OOD38_1015 295 pcbp + Polysaccharide biosynthesis protein WP_237421427.1 99.66
OOD38_1016 207 pcbp + Polysaccharide biosynthesis protein WP_262339904.1 99.52
OOD38_1017 398 wzy + Polysaccharide polymerase ERO40262.1 99.50
OOD38_1018 369 pcbp + Polysaccharide biosynthesis protein WP_088467704.1 99.19
OOD38_1019 359 atf + O-acetyltransferase MCG0909952.1 99.72
OOD38_1020 258 csbp + Capsular biosynthesis protein KRK22728.1 86.67
OOD38_1021 248 eps1A Transcription regulator, AraC family MCG0826270.1 99.60
OOD38_1022 1133 csfp + Cell surface protein precursor KRL33646.1 93.88
OOD38_1023 146 eps2A + MarR family transcriptional regulator WP_151502160.1 99.32
OOD38_1024 473 wzx2 Flippase WP_087613142.1 99.79
OOD38_1025 222 eps2E Priming glycosyltransferase ACT61928.1 100.00
eps genes cluster 2
OOD38_1818 251 epsA + DeoR/GlpR transcriptional regulator OEZ35589.1 99.60
OOD38_1819 305 fruK + 1-phosphofructokinase WP_003640776.1 100.00
OOD38_1820 655 fruA + Fructose PTS, EIIABC WP_128536963.1 99.85
OOD38_1821 440 Tpp + Serine/threonine protein phosphatase family protein ETF10433.1 99.55
OOD38_1822 483 wzx Oligosaccharide flippase family protein WP_061871654.1 100.00
OOD38_1823 322 GTF1 Glycosyltransferase WP_133279738.1 99.69
OOD38_1824 424 wzy Polysaccharide polymerase WP_128468359.1 99.76
OOD38_1825 342 GTF2 Glycosyltransferase WP_112297297.1 99.71
OOD38_1826 363 GTF3 Glycosyltransferase WP_003640783.1 99.72
OOD38_1827 221 epsE Priming glycosyltransferase ADN98952.1 100.00
OOD38_1828 313 rmlB dTDP-glucose 4 6-dehydratase KZU50552.1 99.25
OOD38_1829 273 epsB Tyrosine protein phosphatase MCG0716518.1 99.63
OOD38_1830 235 epsD CpsD family tyrosine-protein kinase WP_213474994.1 99.57
OOD38_1831 252 epsC Tyrosine-protein kinase transmembrane modulator epsC MCG0585072.1 97.70