Table 3.
List of the proteomes used for the BRAKER2 gene prediction pipeline.
| Phylum | Class | Order | Species | GenBank/RefSeq |
|---|---|---|---|---|
| Mollusca | Bivalvia | |||
| Ostreida | Crassostrea gigas | GCF_902806645.1 | ||
| Crassostrea virginica | GCF_002022765.2 | |||
| Pectinida | Mizuhopecten yessoensis | GCF_000457365.1 | ||
| Pecten maximus | GCF_902652985.1 | |||
| Veneroida | Dreissena polymorpha | GCF_020536995.1 | ||
| Mercenaria mercenaria | GCF_014805675.1 | |||
| Unionida | Margaritifera margaritifera | GCA_015947965.1 | ||
| Megalonaias nervosa | GCA_016617855.1 | |||
| Gastropod | Biomphalaria glabrata | GCF_000457365.1 | ||
| Pomacea canaliculata | GCF_003073045.1 | |||
| Gigantopelta aegis | GCF_016097555.1 | |||
| Cephalopod | Octopus bimaculoides | GCF_001194135.1 | ||
| Octopus sinensis | GCF_006345805.1 | |||
| Polyplacophora | Acanthopleura granulata | GCA_016165875.1 | ||
| Chordata | Homo sapiens | GCF_000001405.40 | ||
| Chordata | Ciona intestinalis | GCF_000224145.3 | ||
| Echinodermata | Strongylocentrotus purpuratus | GCF_000002235.4 |