Table 6.

Structural annotation report of the new M. margaritifera genome assembly.

Structural annotation	Number
Number of genes	40,165
Number of mRNAs	48,314
Number of CDSs	48,314
Number of exons	328,489
Number of introns	280,173
Number of start_codons	48,314
Number of stop_codons	48,314
Number of exons in CDSs	328,489
Number of introns in CDSs	280,175
Number of introns in exon	280,175
Number of introns in intron	240,261
Number gene overlapping	440
Number of single exon gene	8,092
Number of single exon mRNAs	8,402
Mean mRNAs per gene	1.2
Mean CDSs per mRNA	1.0
Mean exons per mRNA	6.8
Mean introns per mRNA	5.8
Mean exons per CDS	6.8
Mean introns in CDSs per mRNA	5.8
Mean introns in exons per mRNA	5.8
Mean introns in introns per mRNA	5.0
Total gene length	1,134,996,674
Total mRNA length	1,399,972,668
Total CDS length	65,168,232
Total exon length	65,168,232
Total intron length	1,334,804,372
Total start_codon length	144,942
Total stop_codon length	144,942
Total intron length per CDS	1,334,804,436
Total intron length per exon	1,334,804,436
Total intron length per intron	38,816,274
Mean gene length	28,258
Mean mRNA length	28,976
Mean CDS length	1,348
Mean exon length	198
Mean intron length	4,764
Mean CDS piece length	198
Mean intron in CDS length	4,764
Mean intron in exon length	4,764
Mean intron in intron length	161
Longest gene	492,278
Longest mRNA	492,278
Longest CDS	50,892
Longest exon	14,931
Longest intron	270,677
Longest CDS piece	14,931
Longest intron into CDS part	270,677
Longest intron into exon part	270,677
Longest intron into intron part	14,931
Shortest gene	123
Shortest mRNA	123
Shortest CDS	9
Shortest exon	3
Shortest intron	33