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Tools for batch effect removal of scRNA‐seq data.
| Tools | Language | URL |
|---|---|---|
| Batchelor | Python | https://www.cnpython.com/pypi/batchelor |
| Beer | R | https://github.com/jumphone/BEER |
| Seurat | R | https://github.com/satijalab/seurat |
| scVI | Python | https://github.com/scverse/scvi‐tools |
| MMD‐ResNet | Python | https://github.com/ushaham/BatchEffectRemoval |
| scScope | Python | https://github.com/AltschulerWu‐Lab/scScope |
