Table 1.
Comparison of original and updated M. oleifera genome assemblies and annotations.
| Items | Genome sketch* | This study |
|---|---|---|
| Assembled genome size (Mb) | 1519.8 | 1495.1 |
| Number of scaffolds | 1277 | 514 |
| Scaffold N50 (Mb) | 4.6 | 112.6 |
| Number of contigs | 2987 | 1110 |
| Contig N50 (Mb) | 1.2 | 4.9 |
| Number of gaps | 1710 | 596 |
| Number of protein-coding genes | 24,064 | 27,638 |
| Repeat content (%) | 82 | 75 |
| Average CDS length (bp) | 1281.1 | 1187.7 |
| Average exon number per gene | 6.0 | 5.7 |
| Average exon length (bp) | 244.5 | 261.4 |
| GC content (%) | 35.8 | 36.1 |
*Genome sketch is the previous published assembly from Xu et al.3.