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. 2023 May 19;13:8147. doi: 10.1038/s41598-023-35192-7

Table 3.

Description of physicochemical, medicinal, absorption, distribution, metabolism, excretion, and toxicological properties with their permissible range of rofecoxib, aspirin, AGP, and A1–A7 AGP analogs.

Category Parameters Permissible range Rofecoxib Aspirin AGP A1 A2 A3 A4 A5 A6 A7
Physicochemical property MW 100 ~ 600 314.06 180.04 350.21 334.21 320.2 334.21 320.2 388.19 376.19 362.21
HA  < 38 22 13 25 24 23 24 23 27 27 26
nHA 0–12 4 4 5 4 4 4 4 4 6 5
nHD 0–7 1 1 3 2 2 2 2 2 1 1
TPSA 0–140 67.51 63.6 86.99 66.76 66.76 66.76 66.76 66.76 82.06 64.99
logP (log mol/L) 0–3 3.014 1.237 1.58 2.763 2.435 2.763 2.435 3.229 2.458 2.556
Medicinal chemistry NPscore − 5 to 5 − 0.256 0.122 3.02 2.793 2.936 2.793 2.936 2.224 2.591 2.741
Lipinski Rule MW ≤ 500, logP ≤ 5, nHA ≤ 10, nHD ≤ 5, < 2 violations Accepted Accepted Accepted Accepted Accepted Accepted Accepted Accepted Accepted Accepted
Pfizer Rule logP > 3, TPSA < 75 Rejected Accepted Accepted Accepted Accepted Accepted Accepted Rejected Accepted Accepted
Absorption Caco-2 Permeability (log cm/s)  > − 5.15 − 5.598 − 5.062 − 4.793 − 4.604 − 4.647 − 4.604 − 4.647 − 4.665 − 4.732 − 4.822
Pgp-inhibitor 0–0.3 0.01 0 0 0 0 0 0 0 0.001 0.002
HIA 0–0.3 0.005 0.007 0.245 0.028 0.217 0.028 0.217 0.01 0.007 0.008
F30% 0–0.3 0.003 0.003 0.036 0.006 0.049 0.006 0.049 0.007 0.501 0.02
Distribution PPB  ≤ 0.90 0.99 0.59 0.30 0.57 0.52 0.57 0.52 0.73 0.43 0.47
VD (L/kg) 0.04–20 0.626 0.234 0.612 0.811 0.885 0.811 0.885 0.803 0.839 0.997
BBB Penetration (cm/s) 0 to 1 0.037 0.661 0.955 0.996 0.987 0.996 0.987 0.987 0.995 0.983
Fu  ≥ 5% 0.02 0.61 0.67 0.52 0.54 0.52 0.54 0.31 0.63 0.55
Metabolism CYP inhibitor 0–1 0.146 0.016 0.167 0.407 0.155 0.407 0.155 0.351 0.466 0.412
CYP substrate 0–1 0.358 0.114 0.219 0.283 0.252 0.283 0.252 0.32 0.26 0.246
Excretion CL (ml/min/kg)  > 15 high clearance; 5–15 moderate clearance; < 5 low clearance 0.535 2.736 8.907 14.47 14.712 14.47 14.712 9.945 13.704 13.431
T 1/2 0–0.3 excellent 0.3–0.7 medium; 0.7–1.0 poor 0.116 0.91 0.249 0.119 0.134 0.119 0.134 0.04 0.121 0.087
Toxicology hERG Blockers 0–0.3 excellent 0.3–0.7 medium; 0.7–1.0 poor 0.087 0.015 0.003 0.004 0.004 0.004 0.004 0.005 0.001 0.002
H-HT 0–0.3 excellent 0.3–0.7 medium; 0.7–1.0 poor 0.592 0.258 0.012 0.017 0.017 0.017 0.017 0.029 0.012 0.015
AMES Toxicity 0–0.3 excellent 0.3–0.7 medium; 0.7–1.0 poor 0.006 0.013 0.327 0.266 0.227 0.266 0.227 0.158 0.065 0.271
Skin Sensitization 0–0.3 excellent 0.3–0.7 medium; 0.7–1.0 poor 0.048 0.511 0.026 0.018 0.022 0.018 0.022 0.018 0.032 0.023
IGC50 {− log10[(mg/L)/(1000*MW)]} 3.199 2.661 4.909 4.825 4.967 4.825 4.967 5.002 5.28 5.257
LC50 {− log10[(mg/L)/(1000*MW)]} 4.275 3.748 6.605 6.114 6.293 6.114 6.293 6.461 6.613 6.973

MW, Molecular Weight; nHA, Number of hydrogen bond acceptors; nHD, Number of hydrogen bond donors; TPSA, Topological polar surface area; logP, The logarithm of the n-octanol/water distribution coefficient; NPscore, Natural Product-likeness score; Caco-2 Permeability, The human colon adenocarcinoma cell lines; Pgp-inhibitor, Inhibitor of P-glycoprotein; HIA, Human intestinal absorption; F 30%, The human oral bioavailability 30%; PPB, Plasma protein binding; VD, Volume Distribution; BBB, blood–brain barrier; Fu, fraction unbound in plasma; CYP, cytochrome; CL, clearance; hERG, human ether–A-go-go related gene; H-HT, human hepatotoxicity; IGC50, 50% inhibition growth concentration; LC50, 50% lethal concentration.