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. 2023 May 19;13:8120. doi: 10.1038/s41598-023-33391-w

Table 1.

Overall summary of mutational burden discovered in the Genes and Health cohort for all five gene candidates.

Gene Overall summary of variants (n)
ABCB4 ABCB11 ATP8B1 NR1H4 TJP2
NSV 68 77 50 22 83
After inclusion criteria
Total 41 48 31 9 37
Pathogenicity
LP 22 25 3 0 0
VUS 13 18 23 8 35
Benign 6 4 5 1 2
Phenotypes
ICP 5 5 1 2 3
GD 7 10 6 8
Other 1 (cholangiocarcinoma) 1 (cirrhosis), 1 (cirrhosis with secondary malignant neoplasm of liver and bile duct, and gallstone disease)

Inclusion criteria (< 5% MAF), NSV and at least any of the following: 1. Include all variants with a phenotype 2. Include all variants known in the literature 3. Include all variants with no GnomAD allele frequency but ELGH allele frequency 4. Include all variants with in silico prediction of 7.

GD, gallstone disease, ICP intrahepatic cholestasis of pregnancy, LP likely pathogenic, MAF minor allele frequency, NSV non-synonymous variants, VUS variant of unknown significance.