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. 2023 May 21:1–17. Online ahead of print. doi: 10.1007/s43440-023-00495-z

Table 3.

Docking data for compounds 1- 3 against 3C protease of coxsackievirus B4 and using (PDB ID: 5iyt) as template crystal

Ligand Receptor Interaction Distance E (kcal/mol) Scoring
Co-crystal (NZN) 10.0
 S 30 CG1 VAL 210 (A) H-acceptor 4.26 0.2
 S 30 CG2 VAL 210 (A) H-acceptor 4.12 0.2
 S 30 OH TYR 327 (A) H-acceptor 3.18 2.6
 C 4 6-ring TYR 327 (A) H-pi 4.79 0.2
 6-ring CE1 HIS 199 (A) pi-H 3.54 0.5
 6-ring CE1 HIS 199 (A) pi-H 4.56 0.5
 6-ring NE2 HIS 199 (A) pi-H 3.29 0.3
 6-ring CG1 VAL 210 (A) pi-H 4.46 0.7
Comp. 1 8.1
 N 9 SG CYS 147 (A) H-donor 3.22 3.9
 6-ring CA ALA 144 (A) pi-H 3.47 0.3
 6-ring N GLY 145 (A) pi-H 4.04 0.8
Comp. 2 8.4
 N 12 SG CYS 147 (A) H-donor 3.19 3.6
 S 30 CB THR 142 (A) H-acceptor 4.48 0.4
 6-ring CA ALA 144 (A) pi-H 3.44 0.3
 6-ring N GLY 145 (A) pi-H 4.02 0.7
Comp. 3 9.6
 C17 23 OG1 THR 142 (A) H-donor 3.01 1.1
 O28 1 N GLY 145 (A) H-acceptor 2.75 2.9
 O28 1 N GLN 146 (A) H-acceptor 3.04 1.7
 O28 1 N CYS 147 (A) H-acceptor 3.21 0.6