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Small-angle X-ray scattering ab inito model reconstructions of JEV RNA. (A) JEV 5’ TR RNA, rotations are 180° about both the X- and Y-axis and showing Dmax. (B) JEV 3’ UTR RNA illustrating relative conformational fluidity through clustering analysis of 100 ab inito models. Shown models represent three of the largest clusters of models. (C) JEV 5′ TR + 3′ UTR RNA–RNA complex. JEV 5′ TR is represented in blue, while 3′ UTR is represented in shades of red/purple.
