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. 2023 May 22;13:8293. doi: 10.1038/s41598-023-34916-z

Table 3.

Summary of Protein–ligand interactions estimated from MD computations.

Target PDB Ligand Orientation Average no. of ligand H-bonds EVdW EELEC
As donor As acceptor (kcal·mol−1)
hNNMT 6b1a CC-410 A1 2.5 ± 0.9 0.8 ± 0.8  − 30.1 ± 3.8  + 2.8 ± 12.7
mNNMT 5yji CC-410 B2 1.2 ± 0.8 1.92 ± 0.8  − 30.8 ± 3.4  − 15.0 ± 11.2
5yji CC-410 A1 1.8 ± 0.8 0.44 ± 0.6*  − 32.3 ± 3.3  − 1.5 ± 11.0
5yji SAH N.A 4.6 ± 0.9 5.2 ± 1.2  − 16.7 ± 4.5  + 2.7 ± 14.9

Error values correspond to standard deviations. *All the H-bond data show skewed distributions. No negative values are neither recorded nor expected. N.A. stands for not applicable.