Table 1.
Count of structural variants detected for each mouse genome
| Strain | Total SVs | Insertion | Deletion | Inversion | Bases | Percent genome |
|---|---|---|---|---|---|---|
| 129S1/SvImJ | 59,481 | 31,641 | 27,791 | 49 | 59,583,060 | 2.18 |
| C57BL/6NJ | 7,872 | 6,077 | 1,770 | 25 | 11,249,662 | 0.41 |
| A/J | 57,606 | 30,589 | 26,973 | 44 | 58,753,047 | 2.15 |
| BALB/cByJ | 53,636 | 28,175 | 25,416 | 45 | 56,099,638 | 2.06 |
| BALB/cJ | 53,845 | 28,596 | 25,205 | 44 | 56,083,785 | 2.06 |
| C3H/HeJ | 58,851 | 31,333 | 27,473 | 45 | 58,222,355 | 2.13 |
| C3H/HeOuJ | 59,167 | 31,552 | 27,561 | 54 | 59,774,259 | 2.19 |
| CAST/EiJ | 202,011 | 108,179 | 93,734 | 98 | 163,832,319 | 6.01 |
| CC005/TauUncJ | 67,554 | 36,638 | 30,867 | 49 | 64,084,771 | 2.35 |
| CC015/UncJ | 82,180 | 44,486 | 37,641 | 53 | 75,240,374 | 2.76 |
| CC032/GeniUncJ | 74,412 | 40,356 | 34,002 | 54 | 67,795,817 | 2.48 |
| CC055/TauUncJ | 86,741 | 46,294 | 40,393 | 54 | 82,149,711 | 3.01 |
| CC060/UncJ | 74,115 | 39,672 | 34,395 | 48 | 70,722,386 | 2.59 |
| CC074/UncJ | 75,800 | 40,930 | 34,818 | 52 | 65,807,956 | 2.41 |
| DBA/2J | 59,469 | 31,753 | 27,672 | 44 | 59,156,224 | 2.17 |
| NOD/ShiLtJ | 59,322 | 31,430 | 27,847 | 45 | 57,404,786 | 2.1 |
| NZO/HlLtJ | 60,608 | 32,429 | 28,125 | 54 | 62,428,318 | 2.29 |
| PWD/PhJ | 198,893 | 106,754 | 92,038 | 101 | 157,938,496 | 5.79 |
| PWK/PhJ | 200,301 | 107,968 | 92,223 | 110 | 162,623,052 | 5.96 |
| WSB/EiJ | 82,919 | 42,910 | 39,956 | 53 | 91,213,812 | 3.34 |
Total number of SVs detected in each mouse genome separated by variant type (insertions, deletions, and inversions), the total number of nucleotide bases changed, and the percentage of the genome affected with respect to the GRCm39 reference genome.