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. Author manuscript; available in PMC: 2024 Feb 1.
Published in final edited form as: Surgery. 2022 Dec 2;173(2):464–471. doi: 10.1016/j.surg.2022.10.026

Table II.

Logistic regression model estimates

Model Estimates

Beta OR LCL UCL P value

Surgical site infections
 (Intercept) −5.1187
 Phecode 080: “Postoperative infection” 2.7245 15.25 11.82 19.67 < .001
 Phecode 1011: “Complications of surgical and medical procedures” 0.886 2.43 1.85 3.18 < .001
 At least 1 antibiotic prescribed between 2–30 d after surgery 2.0891 8.08 6.51 10.02 < .001
 Laboratory procedure: Blood culture 2.041 7.7 6.38 9.29 < .001
Urinary tract infections
 (Intercept) −6.1696
 Phecode 590: “Pyelonephritis” 2.3597 10.59 4.44 25.23 < .001
 Phecode 591: “Urinary tract infection” 1.9223 6.84 5.16 9.05 < .001
 Phecode 592.X: “Cystitis,” “Urethritis,” “Urethral stricture due to infection” 1.7764 5.91 3.6 9.7 < .001
 Phecode 599.X: Various symptoms involving the urinary system 1.1322 3.1 2.36 4.09 < .001
 At least 1 antibiotic prescribed between 2—30 d after surgery 1.2781 3.59 2.58 5 < .001
 Laboratory procedure: Urine culture 1.6599 5.26 3.78 7.32 < .001
 Laboratory procedure: Clostridioides difficile PCR 0.4246 1.53 0.92 2.55 0.1
Sepsis
 (Intercept) −7.2263 < .001
 Phecode 540.X: “Acute appendicitis,” “Appendicitis,” “Appendiceal conditions” 2.0447 7.73 5.53 10.79 < .001
 Phecode 994.X: “Sepsis,” “SIRS” 2.4980 12.16 9.23 16.02 < .001
 At least 1 antibiotic prescribed between 2—30 d after surgery 1.6909 5.42 4.14 7.11 < .001
 Laboratory procedure: CBC auto diff 1.3637 3.91 2.07 7.38 < .001
 Laboratory procedure: Blood culture 1.9005 6.69 5.36 8.34 < .001
 Laboratory procedure: Magnesium serum 1.2173 3.38 2.65 4.30 < .001
 Laboratory procedure: Peripheral blood smear 1.4547 4.28 3.00 6.12 < .001
Pneumonia
 (Intercept) −7.3366
 Phecode 480.X: Bacterial, viral, and fungal pneumonias 2.5952 13.4 9.17 19.57 < .001
 Phecode 501: “Pneumonitis due to inhalation of food or vomitus” 1.7072 5.51 3.03 10.03 < .001
 Phecode 1013: “Asphyxia and hypoxemia” 0.9214 2.51 1.67 3.78 < .001
 At least 1 antibiotic prescribed between 2—30 d after surgery 1.812 6.12 3.59 10.44 < .001
 Laboratory procedure: Magnesium serum 0.7905 2.2 1.37 3.56 .001
 Laboratory procedure: Vancomycin trough 0.9937 2.7 1.84 3.96 < .001
 Laboratory procedure: Respiratory culture 1.4024 4.06 2.52 6.55 < .001
 Laboratory procedure: Blood gasses 1.511 4.53 3.02 6.79 < .001

CBC, complete blood count; LCL, lower confidence limit; OR, odds ratio; PCR, polymerase chain reaction; SIRS, systemic inflammatory response syndrome; UCL, upper confidence limit.