Table 1.
Annotations of coding regions identified both by GWAS and LDA approaches
| Functional category | Gene name | Annotation |
|---|---|---|
| Virulence | fnbA | Fibronectin binding protein FnbA |
| sdrC | MSCRAMM family adhesin SdrC | |
| sdrE | MSCRAMM family adhesin SdrE | |
| Transport system | pstC | Phosphate ABC transporter permease subunit C |
| AID38744.1 | YjiH: uncharacterized membrane protein, contains nucleoside recognition GATE domain | |
| fhuC | FepC: ABC-type cobalamin/Fe3+-siderophores transport system | |
| Carbohydrate metabolism | hemL1 | Glutamate-1-semialdehyde 2,1-aminomutase |
| Amino acid metabolism | AID38605.1 | Has three different domains: amino acid adenylation domain, a peptide synthase and Lys2B |
| tRNA synthesis | truB | tRNA pseudouridine synthase B (PRK14123) |
| Unknown function | Hypothetical | Conserved hypothetical protein |
| AID39364.1 | Uncharacterized DUF86 domain-containing protein-like Bacillus subtilis YutE |