TABLE 1.
Primer pairs used for amplification of QMDV fragments from QT35 cells by PCR and RT-PCR
MDV gene | GenBank data
|
Primer sequences (5′ to 3′) | Size (bp) | Primer | |
---|---|---|---|---|---|
Accession no. | Nucleotides | ||||
ICP4 | U17705 | 6978–6953 | CTTTATGCGACTGGCGTGCTGCCGTA | 674 | ICP4-5′a |
6305–6328 | TCCTCCTGCACGCCTGTTTGCGGT | ICP4-3°a | |||
LAT | U17705 | 6242–6261 | TGTCACCTGAATATCATTGC | 329 | LATs2-5 |
6570–6551 | CCTCTTCATCTTCCTCCTCT | LATs2-3 | |||
ICP22 | L22174 | 1282–1302 | ATGAGAGCGACGACGAAGATT | 331 | 5′RT ICP22 |
1612–1595 | AGAGTCCTGCGCAGATGTGGA | 3′RT ICP22 | |||
ICP27 | U10040 | 2167–2188 | CAAGAAGGGCATCACCGAAGAA | 31 | 5′RT ICP27 |
2482–2461 | GACCCGCATGCAATAAATACTC | 3′RT ICP27 | |||
meq | M89471 | 431–450 | GGTCGACTTCGAGACGGAAA | 337 | 5meq/meqsRT |
767–748 | GTAAGCAGTCCAAGGGTCAC | 3meqRTanti | |||
pp38 | M73484 | 1303–1320 | CGAGGACGGCGAGAAATG | 404 | 5′pp38 |
1706–1686 | TTAATGCGCGAACGGAATGTA | 3′pp38 | |||
VP16 | L10283 | 2069–2091 | GGCCGATTTACCTTCTTATGTAG | 451 | 5′VP16 |
2519–2500 | CCGGAGTTCAGGAGCAGTC | 3′VP16 | |||
ORF L1 | L19763 | 869–892 | TTGTTCACTGTGCGGCATTATTAC | 345 | 5′RT ORF L1 |
1213–1192 | TACCGGCACCGACAGTTCTTTA8 | 3′RT ORF L1 | |||
pp14 | D13389 | 5804–5823 | GAGGTTCTGGCAGAGATTCC | 542 | pp14F |
6345–6325 | CTGCTTGTATGCTACAACGGC | pp14R | |||
gB | D13713 | 1292–1315 | GTGCAACAGTTAATGGGAGATACA | 457 | 5′gB |
1748–1725 | AGCATGGCGAATTGAACAGACGAT | 3′gB |
Data are from Xing et al. (68).