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. 2023 Jan 4;46(3):603–628. doi: 10.1007/s13402-022-00765-7

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Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 6 — Higher resolution subtyping of breast cancer cell lines and HER2 characterization. a Violin plot outlining expression of hormone receptor gene ESR1, with high expression observed in epithelial primary tumor cell clusters. b Violin plots outlining expression of hormone receptor gene PGR. c Violin plot outlining expression of receptor genes ERBB2. d DotPlot outlining expression of genes identified as differentially expressed by HER2 + cell samples. e Network analysis of genes differentially expressed by global ERBB2 + cells. f Network analysis of genes differentially expressed by global ERBB2- cells