Table 4.
CpG | chr | position | Gene Symbol | Gene Group | On special occasions | Once per week | 3–5 times per week | Regularly | F | P-Value | Adjusted P-Value |
---|---|---|---|---|---|---|---|---|---|---|---|
cg05107281 | chr11 | 47072710 | CSTPP1 | Body | −0.004 | −0.010 | −0.014 | 0.001 | 9.4 | 1.6E–07 | 0.12 |
cg06499565 | chr20 | 35374747 | NDRG3 | TSS1500 | 0.001 | 0.006 | 0.000 | −0.001 | 8.7 | 5.7E–07 | 0.17 |
cg10054857 | chr18 | 61816543 | LINC00305 | TSS1500 | −0.004 | −0.007 | −0.002 | −0.002 | 8.4 | 1.0E–06 | 0.17 |
cg24344693 | chr10 | 133273964 | −0.004 | 0.003 | −0.001 | −0.002 | 8.2 | 1.5E–06 | 0.17 | ||
cg20226924 | chr5 | 133985272 | SEC24A | Body | 0.001 | 0.003 | 0.003 | 0.001 | 8.2 | 1.5E–06 | 0.17 |
cg05575921 | chr5 | 373378 | AHRR | Body | −0.003 | −0.011 | −0.012 | −0.020 | 8.1 | 1.7E–06 | 0.17 |
cg21161138 | chr5 | 399360 | AHRR | Body | −0.004 | −0.011 | −0.009 | −0.012 | 8.1 | 1.7E–06 | 0.17 |
cg19730404 | chr9 | 139361517 |
SEC16A; SEC16A |
ExonBnd;Body | −0.003 | −0.001 | 0.001 | −0.004 | 7.8 | 2.8E–06 | 0.25 |
cg19308363 | chr12 | 116290566 | 0.006 | 0.005 | −0.005 | −0.015 | 7.7 | 3.4E–06 | 0.25 | ||
cg08258765 | chr5 | 24841586 | LOC340107 | TSS1500 | 0.005 | 0.002 | 0.004 | −0.002 | 7.7 | 3.8E–06 | 0.25 |
cg03838168 | chrX | 48433876 | RBM3 | Body | −0.003 | −0.004 | 0.015 | 0.005 | 7.7 | 3.9E–06 | 0.25 |
cg16822035 | chr13 | 113633379 | MCF2L;MCF2L | Body;TSS1500 | 0.001 | 0.004 | 0.009 | 0.012 | 7.6 | 4.0E–06 | 0.25 |
cg11756734 | chr12 | 9028945 | A2ML1 | 3‘UTR | −0.005 | 0.002 | −0.007 | 0.003 | 7.5 | 4.8E–06 | 0.26 |
cg08415592 | chr22 | 36648973 | APOL1 | TSS200 | 0.008 | 0.016 | −0.004 | 0.007 | 7.4 | 5.8E–06 | 0.26 |
cg17325792 | chr1 | 77042560 |
ST6GALNAC3; ST6GALNAC3 |
3‘UTR;Body | 0.003 | 0.001 | 0.003 | −0.011 | 7.4 | 6.6E–06 | 0.26 |
Note: The CpG sites are annotated based on the chromosome (chr), the position (pos), the gene symbol from HGNC, and the gene group (based on the position of the CpG regarding the nearest gene). Each CpG site has a beta value for each consumer group vs non-consumers, a F-statistic (F), a nominal p-value, and an adjusted p-value by Bonferroni.