Table 2.
Minor allele frequency and Hardy-Weinberg equilibrium of rs1597000001
| Aotearoa NZ Discovery cohort |
Samoan Replication cohorts |
Pacific Trust Otago Cohort |
|||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ Māori | CI Māori | Samoan | Tongan | Niuēan | Pukapukan | Other/Mixed | Ngāti Porou Hauora | Samoan I | Samoan II | Samoan III | Polynesian | Non-Polynesian Pacific peoples | |
| Total (n) | 814 | 172 | 322 | 155 | 37 | 72 | 232 | 270 | 2851 | 908 | 550 | 220 | 35 |
| CC (n) (%) |
760 (93.4) | 159 (92.4) | 297 (92.2) | 143 (92.3) | 33 (89.2) | 72 (100.0) | 212 (91.4) | 257 (95.2) | 2600 (91.2) | 825 (90.9) | 497 (90.4) | 201 (91.4) | 35 (100.0) |
| CT (n) (%) |
52 (6.4) | 13 (7.6) | 24 (7.5) | 11 (7.1) | 4 (10.8) | 0 (0.0) | 19 (8.2) | 13 (4.8) | 242 (8.5) | 80 (8.8) | 53 (9.6) | 18 (8.2) | 0 (0.0) |
| TT (n) (%) |
2 (0.3) | 0 (0.0) | 1 (0.3) | 1 (0.7) | 0 (0.0) | 0 (0.0) | 1 (0.4) | 0 (0.0) | 9 (0.3) | 3 (0.3) | 0 (0.0) | 1 (0.5) | 0 (0.0) |
| MAF | 0.034 | 0.039 | 0.040 | 0.042 | 0.054 | 0.000 | 0.045 | 0.024 | 0.046 | 0.047 | 0.048 | 0.045 | 0.000 |
| HWE p | 0.244 | 1.000 | 0.409 | 0.231 | 1.000 | 1.000 | 0.377 | 1.00 | 0.191 | 0.448 | 0.629 | 0.364 | 1.000 |
MAF, minor allele frequency; HWE, Hardy-Weinberg equilibrium; NZ, New Zealand; CI, Cook Islands).