Table 2.
The information of the detected pod size SNPs in current study.
| Trait | SNP | Year(s) | Chr | Pos | LOD | Marker R 2 |
|---|---|---|---|---|---|---|
| PL | Pv_0026128 | 2020 | 1 | 19213953 | 3.63 | 22.32% |
| Pv_0285901 | 2020 | 4 | 344060 | 3.71 | 23.90% | |
| Pv_0311899 | 2020 | 4 | 17510650 | 3.53 | 13.47% | |
| Pv_0429726 | 2021 | 5 | 14767260 | 3.93 | 16.58% | |
| Pv_0445220 | 2020 and 2021 | 5 | 25626390 | 4.16 | 20.33% | |
| Pv_0562916 | 2020 | 7 | 13389784 | 3.58 | 18.23% | |
| Pv_1016502 | 2021 | 11 | 1129181 | 3.56 | 21.11% | |
| Pv_1129860 | 2020 | 11 | 47823838 | 3.51 | 19.17% | |
| Pv_1154801 | 2020 | 11 | 51850889 | 3.60 | 22.37% | |
| PT | Pv_0002282 | 2021 | 1 | 3846586 | 3.51 | 27.14% |
| Pv_0029912 | 2020 | 1 | 21338661 | 3.94 | 21.39% | |
| Pv_0201428 | 2020 | 2 | 48802744 | 3.69 | 29.50% | |
| Pv_0212827 | 2021 | 3 | 4133573 | 3.51 | 22.87% | |
| Pv_0579990 | 2020 | 7 | 19691399 | 3.71 | 24.30% | |
| Pv_0684832 | 2020 | 8 | 8785254 | 3.57 | 19.69% | |
| Pv_0685388 | 2020 | 8 | 9098191 | 3.93 | 30.82% | |
| PW | Pv_0008234 | 2020 and 2021 | 1 | 5648221 | 6.92 | 47.27% |
| Pv_0127220 | 2020 and 2021 | 2 | 28035744 | 6.28 | 37.42% | |
| Pv_0193604 | 2020 | 2 | 43687336 | 6.60 | 38.01% | |
| Pv_0195014 | 2020 | 2 | 46751740 | 6.22 | 38.70% | |
| Pv_0203965 | 2020 | 2 | 48895245 | 6.23 | 35.07% | |
| Pv_0226301 | 2020 and 2021 | 3 | 12533721 | 6.14 | 48.33% | |
| Pv_0272703 | 2020 and 2021 | 3 | 32138995 | 6.04 | 51.31% | |
| Pv_0274424 | 2020 and 2021 | 3 | 33692550 | 6.83 | 43.40% | |
| Pv_0298015 | 2020 and 2021 | 4 | 8968938 | 6.00 | 44.63% | |
| Pv_0303974 | 2020 and 2021 | 4 | 13113489 | 6.02 | 39.84% | |
| Pv_0366735 | 2020 and 2021 | 4 | 46263029 | 7.06 | 45.80% | |
| Pv_0368967 | 2020 | 4 | 47052667 | 6.07 | 42.89% | |
| Pv_0421055 | 2020 and 2021 | 5 | 8368043 | 6.92 | 55.70% | |
| Pv_0428704 | 2020 | 5 | 14219936 | 6.37 | 46.13% | |
| Pv_0447805 | 2020 and 2021 | 5 | 27146151 | 6.05 | 44.38% | |
| Pv_0519622 | 2020 and 2021 | 6 | 18274170 | 6.42 | 34.04% | |
| Pv_0545768 | 2020 | 7 | 3001451 | 6.29 | 41.86% | |
| Pv_0547992 | 2020 and 2021 | 7 | 5917854 | 6.33 | 47.38% | |
| Pv_0602824 | 2020 | 7 | 25300279 | 6.70 | 51.51% | |
| Pv_0721251 | 2020 and 2021 | 8 | 31136317 | 6.09 | 36.65% | |
| Pv_0802255 | 2020 and 2021 | 9 | 7474435 | 6.48 | 48.03% | |
| Pv_1169490 | 2020 and 2021 | 11 | 53574929 | 6.05 | 49.57% | |
| SPW | Pv_0015964 | 2020 | 1 | 12473517 | 3.65 | 17.25% |
| Pv_0165916 | 2020 | 2 | 36567260 | 3.98 | 30.29% | |
| Pv_0223474 | 2020 | 3 | 11173316 | 3.68 | 27.31% | |
| Pv_0237496 | 2020 | 3 | 16882167 | 4.14 | 28.93% | |
| Pv_0527678 | 2021 | 6 | 26312586 | 3.53 | 24.43% | |
| Pv_0527777 | 2020 | 6 | 26833487 | 3.59 | 23.74% | |
| Pv_0686810 | 2020 | 8 | 9704115 | 3.52 | 27.79% | |
| Pv_0692879 | 2020 | 8 | 13885583 | 3.93 | 32.25% | |
| Pv_0791404 | 2020 | 8 | 63047615 | 3.73 | 19.24% | |
| Pv_0932953 | 2020 | 10 | 12316708 | 3.82 | 23.97% | |
| Pv_0933835 | 2020 | 10 | 12783478 | 3.91 | 31.57% | |
| Pv_0939702 | 2020 | 10 | 16283834 | 3.88 | 28.21% | |
| Pv_0940934 | 2020 | 10 | 16955046 | 4.24 | 31.88% | |
| Pv_0948680 | 2021 | 10 | 20652263 | 3.51 | 38.28% | |
| Pv_0959635 | 2020 | 10 | 27212413 | 4.06 | 35.19% | |
| Pv_0961930 | 2020 | 10 | 28382540 | 4.11 | 32.87% | |
| Pv_0968910 | 2020 | 10 | 32052969 | 3.93 | 32.43% | |
| Pv_0974939 | 2020 | 10 | 34687854 | 3.51 | 23.43% | |
| Pv_0977521 | 2021 | 10 | 35814018 | 3.52 | 17.54% |
LOD, logarithm of the odds; PL, pod length; PT, pod thickness; PW, pod width; SPW, single pod weight.