Table 3.
Quality control of mRNA and long-chain non-coding RNA sequencing.
| Sample Name | Raw Reads | Clean Reads | Clean Bases | Error Rate (%) | Q20 (%) | Q30 (%) | GC Content (%) |
|---|---|---|---|---|---|---|---|
| GF_R_1 | 95151460 | 94466002 | 12.79G | 0.03 | 97.58 | 93.48 | 52.04 |
| GF_R_2 | 83295944 | 82575946 | 14.17G | 0.03 | 97.62 | 93.66 | 55.92 |
| GF_R_3 | 99995438 | 99117250 | 12.39G | 0.03 | 97.62 | 93.60 | 52.20 |
| GFF_R_1 | 81517354 | 80087068 | 12.01G | 0.03 | 97.48 | 93.33 | 51.38 |
| GFF_R_2 | 79648920 | 78647860 | 11.80G | 0.03 | 97.59 | 93.55 | 52.30 |
| GFF_R_3 | 91568644 | 90891982 | 13.63G | 0.03 | 97.72 | 93.81 | 49.97 |
| TMR_R_1 | 85349140 | 84721348 | 12.71G | 0.03 | 97.60 | 93.48 | 48.89 |
| TMR_R_2 | 85825104 | 85003696 | 12.75G | 0.03 | 97.70 | 93.81 | 52.33 |
| TMR_R_3 | 86443542 | 85679884 | 12.85G | 0.03 | 97.71 | 93.78 | 50.36 |