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. 2023 May 16;14(5):1093. doi: 10.3390/genes14051093

Table 4.

ncRNAs and their potential target genes involved in rumen development.

Group miRNAs circRNAs lncRNAs mRNAs
GF vs. GFF bta-miR-11973 novel_circ_0014053, novel_circ_0012977, novel_circ_0013002 XLOC_432876, XLOC_480762, XLOC_1012137, XLOC_098896 MAL, PLD4, CIDEC,
bta-miR-1 novel_circ_0010053 XLOC_511980, XLOC_1005675, XLOC_1005790, XLOC_062658, XLOC_122211 CLEC6A
bta-miR-2890 novel_circ_0003758, novel_circ_0010053 XLOC_1001781, XLOC_999381, XLOC_654245, XLOC_998773 FEV, MGLL, CACNG2,
PLA2G2E
GFF vs. TMR bta-miR-200c novel_circ_0021078,
novel_circ_0021086,
novel_circ_0016391,
novel_circ_0008818,
XLOC_514666, XLOC_223927, XLOC_546291, XLOC_005658 XLOC_398026, XLOC_1006227, XLOC_629685, XLOC_1001314XLOC_1013447
bta-miR-211 novel_circ_0015818,
novel_circ_0015854,
novel_circ_0011652,
novel_circ_0016548,
novel_circ_0011061
GTPBP4, XLOC_1006044, XLOC_998134.SPDYA XLOC_253297, XLOC_443744, PLEKHS1, XLOC_830139
GF vs. TMR bta-miR-11975 novel_circ_0012104,
novel_circ_0007245
CDCP1, EFHB, XLOC_996619, XLOC_996619, XLOC_1003325, LYRM1, XLOC_1001987, FBXL19 NKX6-1, OTP, PADI3
bta-miR-2411-3p novel_circ_0010813,
novel_circ_0001964
XLOC_999378, SLX4IP, SLX4IP, XLOC_59297 XLOC_1005215, XLOC_830139