Table 2.
Example of Tredegar results with passing quality metrics.
| Sample | rq_1 | r2_q | est_genome_length | est_cvg | number_contigs | species_prediction | subspecies_prediction |
|---|---|---|---|---|---|---|---|
| 2022EP-00093 | 35.26 | 31.45 | 5524279 | 81.33 | 74 | Klebsiella_pneumoniae | NA |
| 2022EP-00091 | 37.09 | 34.98 | 3807676 | 85.89 | 51 | Acinetobacter_baumannii | NA |
| 2022EP-00092 | 35.04 | 31.55 | 5398118 | 59.17 | 47 | Serratia_marcescens | NA |
| 2021EP-00104 | 36.91 | 35.32 | 3871668 | 145.61 | 93 | Acinetobacter_baumannii | NA |
| 2021EP-00106 | 36.7 | 34.64 | 3937667 | 105.59 | 100 | Acinetobacter_baumannii | NA |
| 2022EP-00007 | 35.69 | 32.16 | 5313287 | 102.98 | 147 | Escherichia_coli | O102:H6 |