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. 2023 May 31;13:8794. doi: 10.1038/s41598-023-36039-x

Table 2.

Functional annotations according to the subsystem analysis of the Kutzneria genomes show their genes distribution in different functional categories.

Kutzneria chonburiensis Kutzneria sp. 744 Kutzneria kofuensis Kutzneria sp. CA-103260 Kutzneria buriramensis Kutzneria albida Kutzneria viridogrisea
Proteins with functional assignments 5454 6003 5513 5964 5879 5218 5291
Hypothetical proteins 4249 5369 3977 4593 5534 3883 4272
Proteins with PATRIC subsystem assignment 2241 2196 2260 2425 2423 2339 2388
Annotation completeness (%) 98.3 86.2 99.8 99.7 99.6 99.5 99.5
Annotation fragmented BUSCOs 4 22 1 0 2 1 1
Annotation missing BUSCOs 2 27 0 1 0 1 1
Subsystems
 Metabolism 1063 1011 1088 1220 1188 1142 1173
 Protein processing 266 243 267 269 268 276 273
 Stress response 190 181 191 194 194 204 208
 Energy 345 329 335 356 366 315 327
 DNA processing 92 113 101 95 110 75 75
 Cellular processing 102 112 93 92 96 113 113
 RNA processing 44 43 45 43 44 43 43
 Membrane transport 46 75 49 51 57 67 69
 Cell envelops 28 23 28 34 29 33 35
 Regulation and cell signaling 41 44 41 46 46 41 42
 Miscellaneous 24 22 22 25 25 30 30

Numbers in columns indicate the gene abundance.