Table 2.
Functional annotations according to the subsystem analysis of the Kutzneria genomes show their genes distribution in different functional categories.
| Kutzneria chonburiensis | Kutzneria sp. 744 | Kutzneria kofuensis | Kutzneria sp. CA-103260 | Kutzneria buriramensis | Kutzneria albida | Kutzneria viridogrisea | |
|---|---|---|---|---|---|---|---|
| Proteins with functional assignments | 5454 | 6003 | 5513 | 5964 | 5879 | 5218 | 5291 |
| Hypothetical proteins | 4249 | 5369 | 3977 | 4593 | 5534 | 3883 | 4272 |
| Proteins with PATRIC subsystem assignment | 2241 | 2196 | 2260 | 2425 | 2423 | 2339 | 2388 |
| Annotation completeness (%) | 98.3 | 86.2 | 99.8 | 99.7 | 99.6 | 99.5 | 99.5 |
| Annotation fragmented BUSCOs | 4 | 22 | 1 | 0 | 2 | 1 | 1 |
| Annotation missing BUSCOs | 2 | 27 | 0 | 1 | 0 | 1 | 1 |
| Subsystems | |||||||
| Metabolism | 1063 | 1011 | 1088 | 1220 | 1188 | 1142 | 1173 |
| Protein processing | 266 | 243 | 267 | 269 | 268 | 276 | 273 |
| Stress response | 190 | 181 | 191 | 194 | 194 | 204 | 208 |
| Energy | 345 | 329 | 335 | 356 | 366 | 315 | 327 |
| DNA processing | 92 | 113 | 101 | 95 | 110 | 75 | 75 |
| Cellular processing | 102 | 112 | 93 | 92 | 96 | 113 | 113 |
| RNA processing | 44 | 43 | 45 | 43 | 44 | 43 | 43 |
| Membrane transport | 46 | 75 | 49 | 51 | 57 | 67 | 69 |
| Cell envelops | 28 | 23 | 28 | 34 | 29 | 33 | 35 |
| Regulation and cell signaling | 41 | 44 | 41 | 46 | 46 | 41 | 42 |
| Miscellaneous | 24 | 22 | 22 | 25 | 25 | 30 | 30 |
Numbers in columns indicate the gene abundance.