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. 2023 Jun 1;124:108535. doi: 10.1016/j.jmgm.2023.108535

Fig. 5.

Fig. 5

The interaction free energy between PF_12_9_3 and SARS-CoV-2 Mpro via FEP calculations. Each circle corresponds to the average over 4 independent trajectories of the free energy computed via the BAR method over 100 ps of λ-alteration simulations. The absolute binding free energy ΔGFEP is the sum of ΔGcou and ΔGvdW. The error is the standard error of the average.