Table 2 .

eQTL reproducibility test using BRCA subsets

Set 1 sample size	Set 2 sample size	Set 1 eQTL	Set 2 eQTL	Set 1 versus set 2 overlap	Inconsistency rate
C200	C400	3899	16 614	3350	0.0%
C200	C600	3899	60 063	3460	0.0%
C200	C800	3899	89 187	3445	0.0%
C400	C600	16 614	60 063	15 002	0.0%
C400	C800	16 614	89 187	14 655	0.0%
C600	C800	60 063	89 187	47 673	0.0%