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. Author manuscript; available in PMC: 2024 May 16.
Published in final edited form as: ChemMedChem. 2023 Mar 17;18(10):e202200593. doi: 10.1002/cmdc.202200593

Table 2.

The TOP1 and TDP1 Inhibitory Potency, and Cytotoxicity of 33–45.

graphic file with name nihms-1886813-t0014.jpg

GI50 ± SD (μM)[c]
Cpd n R TOP1
Inhibition[a]
IC50 (μM)
for TDP1[b]
HCT-116 MCF-7
4 /d / 0/+ >111 75 ± 4.4 >100
33 0 H + >111 >100 >100
34 2 NMe2 + 37–111 11 ± 0.48 27 ± 1.5
35 3 0 18 ± 6.9 0.55 ± 0.17 1.2 ± 0.10
36 2 NEt2 0 >111 2.1 ± 0.23 1.6 ± 0.17
37 3 + 15 ± 2.4 2.4 ± 0.11 2.0 ± 0.10
38 2 graphic file with name nihms-1886813-t0015.jpg +++ 37–111 0.25 ± 0.02 6.4 ± 1.0
39 3 + 15 ± 2.8 1.3 ± 0.21 1.4 ± 0.13
40 2 graphic file with name nihms-1886813-t0016.jpg ++ >111 15 ± 1.08 18 ± 0.67
41 3 + >111 3.3 ± 0.73 7.9 ± 1.0
42 3 OH + >111 38 ± 2.31 51 ± 1.6
43 3 NH(CH2)2OH + 10 ± 3.8 0.29 ± 0.19 2.2 ± 1.2
44 3 graphic file with name nihms-1886813-t0017.jpg 0/+ >111 10 ± 1.2 7.0 ± 0.55
45 3 graphic file with name nihms-1886813-t0018.jpg 0 >111 >100 85 ± 3.8
[a]

TOP1 cleavage inhibitory activity of the compounds was semiquantitatively expressed relative to CPT at 1 μM as follows: 0, no inhibition; 0/+, less than 20%; +, between 20% and 50% activity; ++, between 50% and 75% activity; +++, between 75% and 95% activity.

[b]

IC50 values for TDP1 inhibition, defined as the concentration of compound that inhibits 50% of enzyme activity, were detected through the gel-based assays.

[c]

The cytotoxicity GI50 value was defined as the concentration corresponding to 50% cell growth inhibition and obtained from MTT assay. Every experiment was repeated at least three times independently.

[d]

“/” means “inapplicable”.