Table 1.
Variation in protein sequence encoded by P. aeruginosa isolates. Using the sequences returned by blastn, we translated genes with full-length nucleotide sequences to determine the number of unique protein sequences encoded by the isolates in the database. We found that LasR had the most unique sequences across queried isolates, and RsaL encoded the fewest unique sequences
|
Gene |
Gene length |
Genes returned |
Unique protein sequences |
Unique sequences/gene length |
|---|---|---|---|---|
|
rsaL |
243 |
806 |
18 |
0.07 |
|
rpsL |
372 |
829 |
27 |
0.07 |
|
lasI |
606 |
809 |
61 |
0.10 |
|
rhlI |
606 |
827 |
87 |
0.14 |
|
vqsR |
807 |
816 |
89 |
0.11 |
|
qscR |
714 |
823 |
98 |
0.14 |
|
pqsB |
852 |
822 |
103 |
0.12 |
|
pqsE |
906 |
818 |
117 |
0.13 |
|
mucA |
585 |
713 |
120 |
0.21 |
|
pqsR |
999 |
818 |
122 |
0.12 |
|
pqsD |
1014 |
820 |
125 |
0.12 |
|
pqsC |
1047 |
823 |
128 |
0.12 |
|
rhlR |
726 |
819 |
133 |
0.18 |
|
pqsL |
1197 |
827 |
169 |
0.14 |
|
pqsA |
1554 |
790 |
170 |
0.11 |
|
pqsH |
1149 |
829 |
189 |
0.16 |
|
lasR |
720 |
756 |
259 |
0.36 |