Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2023 Jun 1;14:3056. doi: 10.1038/s41467-023-38610-6

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Fig. 3 — a, b Distribution of genes for which more than 50% of expression variation is explained by one of three predictor variables: sampled island, Pocillopora genetic lineage, and Cladocopium lineage. a Gene expression of Pocillopora across 101 samples (the hybrid colony was excluded). b Gene expression of Cladocopium across 70 samples. Samples of mixed lineage, from Rapa Nui island, and those containing Durusdinium were excluded. The number of genes in each distribution is indicated above each violin plot. Boxplots within violins display group medians (horizontal dark bar), interquartile range (bounds of box) and the minimum and maximum values (whiskers). Potential outliers are denoted as solid dots. c Gene Ontology enrichment analysis dot plots showing the top enriched biological process GO terms identified for each gene from comparison to a Wallenius noncentral hypergeometric sampling distribution allowing for P value calculation after accounting for selection bias and correction for multiple testing (FDR ≤ 0.05) using GOSeq (v1.40.0). Pocillopora genes with the highest explained variance under the island of sampling (left panel), host genetic lineage (middle panel), and photosymbiont lineage (right panel) variables are indicated. The x axis position and size of each dot reflects the proportion and absolute number of enriched genes (N) sharing that GO term, respectively, and the color of the dot indicates the enrichment significance. Source data are provided as a Source Data file.