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. 2023 Jun 1;24:123. doi: 10.1186/s13059-023-02960-7

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 5 — A Comparison of the number of genes in amplified gene families of Porites lobata and Pocillopora cf. effusa genomes. Gene families are grouped by their functional annotation. The largest gene family is indicated by a colored bar, for P. cf. effusa (red) and P. lobata (orange). B K_s distribution of Porites lobata and Pocillopora cf. effusa tandemly duplicated gene pairs (TDG) and allelic gene pairs (BRH between haplotype 1 and haplotype 2 annotations “hap1/hap2”). C K_s distributions for TDG pairs in P. lobata (Pl) and P. cf. effusa (Pm) for 11 orthogroups (OG) that are amplified in corals and contain NACHT domains