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. 2023 Jun 2;22:44. doi: 10.1186/s12941-023-00596-w

Table 4.

Next-generation sequencing of CSF for the 8 NB cases

Case Time from onset to CSF collection (days) Sample volume (µl) Specific reads (bp) Genomic coverage (%) Relative abundance (%) Depth (X) Proportion of human host sequences (%)
1 35 500 266 0.53 3.32 1.15 99.85
2 60 500 448 0.87 1.17 1.2 96.03
3 180 500 8 0.02 0.48 1.1 99.47
4 30 500 86 0.20 82.40 1.08 99.95
5 365 500 116 0.13 3.47 1.24 99.27
6 15 500 126 0.26 7.17 1.11 99.65
7 540 500 264 0.57 3.79 1.06 99.70
8 17 500 72 0.14 0.13 1.19 73.85

CSF cerebrospinal fluid, NB neurobrucellosis