Table 2. The data content of the GENES database entry.
Field | Content | Links | Data source |
---|---|---|---|
ENTRY |
Entry identifier (gene accession number) |
LinkDB database |
GenBank or original database |
NAME |
Gene names and alternative names |
|
GenBank or original database |
DEFINITION |
Annotation of gene function |
LIGAND/ENZYME database, SWISS-PROT database and PubMed database |
GenBank, original database, SWISS-PROT and KEGG |
CLASS |
Classification of genes according to the KEGG pathways |
KEGG/PATHWAY database |
KEGG |
POSITION |
Chromosomal position |
KEGG/GENOME map |
GenBank |
DBLINKS |
Outside links |
Original databases and NCBI Entrez database |
|
CODON_USAGE |
Codon usage |
|
Computed |
AASEQ |
Amino acid sequence |
see footnotea |
GenBank or original database |
NTSEQ | Nucleotide sequence | GenBank or original database |
aComputational links are available including sequence similarity searches (FASTA and BLAST), motif search (MOTIF), membrane protein predictions (SOSUI and TSEG), and cellular localization site prediction (PSORT).