| Text/Entry |
Interactive searching of text fields, refine with multiple queries |
http://pir.georgetown.edu/pirwww/search/textpsd.html |
| BLAST |
Sequence similarity search and analysis, graphical output interface |
http://pir.georgetown.edu/pirwww/search/similarity.html |
| FASTA |
Sequence similarity search and analysis, graphical output interface |
http://pir.georgetown.edu/pirwww/search/fasta.html |
| Pattern/Peptide |
Variety of pattern or peptide matching tools |
http://pir.georgetown.edu/pirwww/search/patmatch.html |
| Pairwise alignments |
Alignments of PIR or user-supplied sequences using SSEARCH |
http://pir.georgetown.edu/pirwww/search/pairwise.html |
| Multiple alignments |
Alignments of PIR or user-supplied sequences using CLUSTALW |
http://pir.georgetown.edu/pirwww/search/multaln.html |
| PIR Annotation-Sorted search |
Displays of BLAST or FASTA matches sorted by user-selected annotation |
http://pir.georgetown.edu/pirwww/search/pass.html |
| Domain search |
Domain sequence search using FASTA, graphical output interface |
http://pir.georgetown.edu/pirwww/search/domains.html |
| Global and Domain search |
BLAST and FASTA searching of PSD for global and domain similarity with graphical display |
http://pir.georgetown.edu/pirwww/search/dmsim.html |
| Integrated Environment for Sequence Analysis |
Convenient interface for entry retrieval and sequence and annotation searching |
http://pir.georgetown.edu/pirwww/search/piriesa.html |
| GeneFIND |
Protein family classification by combining several search and alignment tools and the ProClass database |
http://pir.georgetown.edu/gfserver/genefind.html |
