Table 2.
SIRE-White | SIRE-Black/AA | P-value (8) | % change (W-B) | |||
---|---|---|---|---|---|---|
n | % of 1613 | n | % of 835 | |||
TP53 | 331 | 20.52 | 154 | 18.44 | .2181 | 2.1 |
TMPRSS2-ERG | 438 | 27.15 | 98 | 11.74 | <.0001* | 15.4 |
DDR (1) | 219 | 13.58 | 95 | 11.38 | .1264 | 2.2 |
PTEN/PI3K/AKT | 183 | 11.35 | 68 | 8.14 | .0138 | 3.2 |
AR | 137 | 8.49 | 61 | 7.31 | .3481 | 1.2 |
BRAF | 42 | 2.60 | 46 | 5.51 | .0005* | −2.9 |
PTEN | 97 | 6.01 | 39 | 4.6 | .1925 | 1.3 |
CDK12 | 36 | 2.23 | 37 | 4.43 | .0036 | −2.2 |
MMRd (2) | 48 | 2.98 | 26 | 3.11 | .901 | −0.1 |
ERBB2 | 31 | 1.92 | 20 | 2.40 | .457 | −0.5 |
EGFR | 28 | 1.74 | 14 | 1.68 | 1 | 0.1 |
CDKN2A | 14 | 0.87 | <11 | <1.3 | N/A | 0.0 |
FGFR (3) | <11 | <0.7 | <11 | <1.3 | N/A | −0.5 |
IDH1 | <12 | <0.7 | <11 | <1.3 | N/A | −0.2 |
PDGFRA | <13 | <0.7 | <11 | <1.3 | N/A | 0.0 |
RET | 12 | 0.74 | <11 | <1.3 | N/A | 0.5 |
ROS1 | <11 | <0.7 | <11 | <1.3 | N/A | −0.2 |
NTRK (4) | <11 | <0.7 | <11 | <1.3 | N/A | 0.1 |
ALK | <11 | <0.7 | <11 | <1.3 | N/A | 0.1 |
KIT | 13 | 0.81 | <11 | <1.3 | N/A | 0.7 |
ABL1 | <11 | <0.7 | <11 | <1.3 | N/A | 0.3 |
Any actionable (5) | 463 | 28.70 | 213 | 25.51 | .0953 | 3.2 |
FDA approved (6) | 250 | 15.50 | 113 | 13.53 | .2079 | 2.0 |
Putative Germline (7) | 193 | 11.97 | 51 | 6.11 | <.0001* | 5.9 |
(1) DDR: LP/P alteration in ATM, BARD1, BRCA1, BRCA2, BRIP1, CHEK1, CHEK2, FANCA, FANCL, NBN, PALB2, RAD51, RAD51B RAD51C, RAD51D, RAD54L.
(2) MMR deficiency = LP/P alteration in MLH1, MSH2, MSH6, PMS2 and/or MSI-H and/or TMB-H.
(3) FGFR: LP/P alteration in FGFR2, FGFR3.
(4) NTRK: LP/P alteration in NTRK1, NTRK2, NTRK3.
(5) Any actionable: LP/P alteration in DDR, MMRd, ABL1, AKT, BRAF, CDK12, ERBB2, EGFR, IDH1, CDKN2A, NTRK, ALK, FGFR, KIT, PDGFRA, PI3KCA, PTEN, RET, ROS1.
(6) FDA approved: LP/P alteration in MMR deficiency + DDR.
(7) Putative germline = LP/P alteration with VAF>30% in ESMO guideline gene.
(8) *Refers to the Bonferroni corrected value significance level P < .002.