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. 2023 Apr 21;28(6):e473–e477. doi: 10.1093/oncolo/oyad042

Table 2.

Comparison of rates of genomic alterations between White and Black Veterans.

SIRE-White SIRE-Black/AA P-value (8) % change (W-B)
n % of 1613 n % of 835
TP53 331 20.52 154 18.44 .2181 2.1
TMPRSS2-ERG 438 27.15 98 11.74 <.0001* 15.4
DDR (1) 219 13.58 95 11.38 .1264 2.2
PTEN/PI3K/AKT 183 11.35 68 8.14 .0138 3.2
AR 137 8.49 61 7.31 .3481 1.2
BRAF 42 2.60 46 5.51 .0005* −2.9
PTEN 97 6.01 39 4.6 .1925 1.3
CDK12 36 2.23 37 4.43 .0036 −2.2
MMRd (2) 48 2.98 26 3.11 .901 −0.1
ERBB2 31 1.92 20 2.40 .457 −0.5
EGFR 28 1.74 14 1.68 1 0.1
CDKN2A 14 0.87 <11 <1.3 N/A 0.0
FGFR (3) <11 <0.7 <11 <1.3 N/A −0.5
IDH1 <12 <0.7 <11 <1.3 N/A −0.2
PDGFRA <13 <0.7 <11 <1.3 N/A 0.0
RET 12 0.74 <11 <1.3 N/A 0.5
ROS1 <11 <0.7 <11 <1.3 N/A −0.2
NTRK (4) <11 <0.7 <11 <1.3 N/A 0.1
ALK <11 <0.7 <11 <1.3 N/A 0.1
KIT 13 0.81 <11 <1.3 N/A 0.7
ABL1 <11 <0.7 <11 <1.3 N/A 0.3
Any actionable (5) 463 28.70 213 25.51 .0953 3.2
FDA approved (6) 250 15.50 113 13.53 .2079 2.0
Putative Germline (7) 193 11.97 51 6.11 <.0001* 5.9

(1) DDR: LP/P alteration in ATM, BARD1, BRCA1, BRCA2, BRIP1, CHEK1, CHEK2, FANCA, FANCL, NBN, PALB2, RAD51, RAD51B RAD51C, RAD51D, RAD54L.

(2) MMR deficiency = LP/P alteration in MLH1, MSH2, MSH6, PMS2 and/or MSI-H and/or TMB-H.

(3) FGFR: LP/P alteration in FGFR2, FGFR3.

(4) NTRK: LP/P alteration in NTRK1, NTRK2, NTRK3.

(5) Any actionable: LP/P alteration in DDR, MMRd, ABL1, AKT, BRAF, CDK12, ERBB2, EGFR, IDH1, CDKN2A, NTRK, ALK, FGFR, KIT, PDGFRA, PI3KCA, PTEN, RET, ROS1.

(6) FDA approved: LP/P alteration in MMR deficiency + DDR.

(7) Putative germline = LP/P alteration with VAF>30% in ESMO guideline gene.

(8) *Refers to the Bonferroni corrected value significance level P < .002.