Table 2.
Genetic variants associated with cervical cancer in a total of 8624 cases and 400 573 controls of European ancestry (EstBB, FinnGen, UKBB+Kaiser Permanente) and 9229 cervical cancer cases and 490 304 controls in the multi-ancestry meta-analysis (EstBB, FinnGen, UKBB+Kaiser Permanente and Biobank Japan)
Variant (EA) | chr:pos (b37) | P-value European ancestry meta-analysis | P-value multi-ancestry meta-analysis | OR (95% CI) European ancestry meta-analysis | OR (95% CI) Biobank Japan dataset | EAF Eur | EAF Biobank Japan |
Nearest genea |
---|---|---|---|---|---|---|---|---|
rs2268177 (T) | 1:22415410 | 3.8 ![]() |
3.1 ![]() |
1.12 (1.07–1.16) | 1.13 (1.01–1.27) | 0.18 | 0.54 | CDC42 |
rs4849177 (C) | 2:113982584 | 1.3 ![]() |
9.4 ![]() |
0.87 (0.85–0.91) | 0.95 (0.84–1.07) | 0.39 | 0.35 | PAX8 |
rs27069 (T) | 5:1347128 | 6.1![]() |
1.3 ![]() |
0.88 (0.85–0.91) | 0.83 (0.71–0.97) | 0.43 | 0.14 | CLPTM1L |
rs35508382 (G)b | 6:32593144 | 8.4 ![]() |
1.0 ![]() |
0.67 (0.63–0.71) | 0.82 (0.70–0.97) | 0.10 | 0.14 | HLA-DQA1 |
rs12603332 (C) | 17:38082807 | 1.6 ![]() |
1.2 ![]() |
0.90 (0.88–0.93) | 0.96 (0.85–1.09) | 0.49 | 0.72 | ORMDL3 |
aNearest gene based on Open Targets Genetics portal.
bFor European ancestry analysis, we detected on chr6 HLA-region lead signal as rs28718232, P = 2.55 10−44, but it was not a lead signal in the Biobank Japan dataset and therefore we present the common variant rs35508382 for both meta-analyses.