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. 2022 Nov 17;14(6):448–458. doi: 10.1093/procel/pwac060

Figure 3.

Figure 3.

The metal ion binding site of IrtAB in the occluded state. (A) Close-up view of the metal ion binding site in the TM region of IrtA. The density map for metal ion and residues that ligand to this metal is shown in mesh. Interactions between histidine and metal ion are indicated by dashed lines. (B) The ATPase activities of two variants in metal ion binding site were normalized relative to that of the wild-type (WT) IrtAB. Error bars represent mean ± SD based on three independent measurements. (C) Representative cryo-EM 2D class averages of IrtABΔSID (E-Q) and two variants in the presence of 10 mmol/L ATP and MgCl2. (D) Cartoon representation of the structure of IrtAH407ABΔSID (E-Q) in complex with ATP. The density maps for ATP (magenta sticks) and Mg2+ (yellow spheres) are shown as grey mesh and contoured at 9 σ. (E) The density map for the metal ion binding site in IrtAH407A is shown as grey mesh and contoured at 7.5 σ.