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. Author manuscript; available in PMC: 2024 Jan 1.
Published in final edited form as: Nat Immunol. 2023 Apr 27;24(6):1036–1048. doi: 10.1038/s41590-023-01501-5

Extended Data Table 2.

Public datasets analyzed

Dataset Utilization
GSE97087 antitumor Th9,Th1, and Th17
GSE133385

  1. lesional IL9high vs. nonlesional IL9low atopic dermatitis skin

  2. Pre-treatment vs. post-treatment lesional IL9high skin (JAK-SYK inhibitor)
GSE73482

  1. House dust mite stimulated T cells from allergic subjects vs. healthy volunteers

  2. IL9high vs. IL9low house dust mite stimulated T cells from allergic subjects
GSE40666 STAT1 target genes
GSE65621 STAT3 target genes
GSE40463

  1. STAT4 target genes

  2. STAT6 target genes
GSE77656 STAT5 target genes
GSE39756 IRF4 target genes
GSE64409 NFAT target genes
GSE98413 JunB target genes
GSE6281 Pre-exposure vs. post-exposure skin from nickel-allergic patients exposed to nickel for 96 hours
GSE123501

  1. Th9-specific genes (in vitro differentiated Th9 vs. Th1, Th2, Th17, iTreg)

  2. YFP+ lung-resident Th9 cells (papain-induced airway inflammation, IL-9 YFP fate reporter)

  3. GFP+ lung-resident Th9 cells (papain-induced airway inflammation, IL-9 GFP reporter)
E-MTAB-5739 IL-9+ T cell clones expanded from PBMC of healthy volunteers
GSE146170 IL-9+ house dust mite reactive T helper cells isolated from asthmatic patients