Table 4.
Summary of stable QTL and their corresponding significant QTL
| Stable QTL | Significant QTL | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Trait | N Treatment | QTL | Chro.a | Position (cM) | CIb (cM) | QTL | LOD | PVEc (%) | Position (cM) | CI (cM) | AEd |
| PHe | LNk | sqPHLN–C6 | C6 | 42.6 | 41.6–43.5 | qPHLN2–C6c | 4.5 | 7.5 | 42.8 | 41.3–45.3 | + |
| qPHLN1–C6d | 3.3 | 5.2 | 42.5 | 41.3–43.5 | + | ||||||
| BNf | ONl | sqBNON–C9 | C9 | 116.7 | 108.1–125.3 | qBNON2–C9a | 3.3 | 7.4 | 114.0 | 106.0–137.6 | + |
| qBNON3–C9b | 3.7 | 7.4 | 117.3 | 107.2–137.2 | + | ||||||
| qBNON1–C9c | 4.8 | 9.4 | 118.3 | 110.2–138.6 | + | ||||||
| LN | sqBNLN–C9 | C9 | 114.6 | 110.6–118.6 | qBNLN2–C9b | 3.7 | 7.4 | 116.5 | 106.7–125.4 | + | |
| qBNLN1–C9c | 4.1 | 7.9 | 113.0 | 106.1–116.5 | + | ||||||
| PNg | ON | sqPNON–A3 | A3 | 97.7 | 96.3–99.0 | qPNON1–A3 | 5.6 | 11.2 | 98.7 | 95.3–104.4 | – |
| qPNON3–A3a | 6.6 | 12.7 | 95.7 | 95.3–98.8 | – | ||||||
| qPNON3–A3b | 4.5 | 8.9 | 100.9 | 100–104.7 | – | ||||||
| LN | sqPNLN–A3 | A3 | 83.5 | 82.0–84.9 | qPNLN1–A3a | 4.5 | 9.1 | 77.9 | 74.0–81.0 | – | |
| qPNLN2–A3b | 2.8 | 5.5 | 84.3 | 77.1–84.7 | – | ||||||
| qPNLN1–A3c | 7.5 | 14.7 | 84.7 | 82.2–85.7 | – | ||||||
| sqPNLN–C | C9 | 125.8 | 116.4–135.2 | qPNLN3–C9a | 7.1 | 15.2 | 124.3 | 111.8–137.8 | + | ||
| qPNLN2–C9b | 3.0 | 5.8 | 127.4 | 113.1–140.4 | + | ||||||
| SNh | ON | sqSNON–A2 | A2 | 48.1 | 47.1–49.1 | qSNON1–A2a | 5.5 | 10.4 | 46.2 | 39.9–48.6 | + |
| qSNON3–A2a | 3.7 | 7.2 | 48.2 | 46.5–48.6 | + | ||||||
| sqSNON–A9 | A9 | 26.3 | 25.0–26.7 | qSNON1–A9b | 3.3 | 6.4 | 26.1 | 23.9–26.7 | – | ||
| qSNON2–A9c | 3.2 | 5.4 | 28.9 | 25.4–35.1 | – | ||||||
| sqSNON–C1 | C1 | 2.6 | 0.6–4.5 | qSNON1–C1a | 2.8 | 5.3 | 3.6 | 1.1–6.1 | + | ||
| qSNON2–C1b | 4.3 | 8.2 | 1.0 | 0.0–6.1 | + | ||||||
| LN | sqSNLN–A9 | A9 | 37.4 | 35.3–39.5 | qSNLN2–A9c | 3.1 | 6.1 | 35.2 | 31.9–38.0 | – | |
| qSNLN1–A9d | 4.5 | 8.7 | 39.4 | 35.2–41.0 | – | ||||||
| SWi | ON | sqSWON–A2 | A2 | 82.9 | 81.0–84.9 | qSWON1–A2b | 5.9 | 8.5 | 80.8 | 78.3–83.8 | + |
| qSWON2–A2a | 3.7 | 6.8 | 84.7 | 80.8–86.9 | + | ||||||
| qSWON3–A2b | 5.1 | 10.1 | 84.0 | 79.9–91.2 | + | ||||||
| sqSWON–A4a | A4 | 12.7 | 10.8–14.6 | qSWON1–A4b | 4.1 | 5.7 | 12.7 | 9.8–14.8 | + | ||
| qSWON2–A4c | 4.9 | 9.0 | 10.8 | 10.4–14.8 | + | ||||||
| sqSWON–A4b | A4 | 20.6 | 18.8–22.4 | qSWON1–A4d | 4.7 | 6.5 | 20.7 | 17.8–23.4 | + | ||
| qSWON2–A4e | 4.5 | 8.5 | 20.7 | 18.1–22.7 | + | ||||||
| LN | sqSWLN–A2a | A2 | 81.4 | 80.1–82.7 | qSWLN2–A2b | 4.7 | 8.5 | 84.7 | 80.1–86.9 | + | |
| qSWLN1–A2c | 8.2 | 13.8 | 80.8 | 80.6–83.4 | + | ||||||
| sqSWLN–A2b | A2 | 97.8 | 87.9–107.7 | qSWLN1–A2d | 4.3 | 13.6 | 100.9 | 86.9–118.9 | + | ||
| qSWLN2–A2c | 4.2 | 11.9 | 95.9 | 86.9–112.1 | + | ||||||
| sqSWLN–A3 | A3 | 58.4 | 57.6–59.3 | qSWLN2–A3f | 5.5 | 10.1 | 59.5 | 58.6–62.7 | + | ||
| qSWLN3–A3g | 2.5 | 5.2 | 58.9 | 58.6–60.8 | + | ||||||
| SYj | ON | sqSYON–C8 | C8 | 15.3 | 10.7–19.9 | qSYON3–C8c | 2.7 | 4.7 | 9.8 | 9.4–20.7 | + |
| qSYON2–C8d | 4.4 | 8.6 | 25.7 | 15.1–30.7 | + | ||||||
| LN | sqSYLN–A2 | A2 | 84.8 | 83.3–86.4 | qSYLN3–A2c | 4.5 | 8.3 | 84.7 | 82.0–86.3 | + | |
| qSYLN2–A2d | 2.6 | 4.6 | 85.0 | 82.0–86.7 | + | ||||||
| sqSYLN–A3 | A3 | 102.6 | 100.5–104.7 | qSYLN3–A3f | 5.1 | 8.8 | 95.7 | 95.3–102.9 | – | ||
| qSYLN2–A3g | 3.7 | 7.1 | 101.9 | 99.8–110.8 | – | ||||||
| qSYLN3–A3h | 2.8 | 5.1 | 106.7 | 103.9–109.6 | – | ||||||
| sqSYLN–C9 | C9 | 124.6 | 117.0–132.1 | qSYLN2–C9a | 3.6 | 6.3 | 125.3 | 111.2–140.4 | + | ||
| qSYLN3–C9b | 8.2 | 15.4 | 124.3 | 117.2–134.9 | + | ||||||
aChro., chromosome; bCI, confidence interval; cPVE, phenotypic variation explained; dAE, additive effect; ePH, plant height; fBN, branch number; gPN, pod number per plant; hSN, seed number per pod; iSW, seed weight of 1000 seeds; jSY, seed yield; kLN, low nitrogen; lON, optimal nitrogen