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. Author manuscript; available in PMC: 2023 Jun 8.
Published in final edited form as: Nat Genet. 2022 Dec 12;55(1):112–122. doi: 10.1038/s41588-022-01248-z

Extended Data Fig. 5 |. Representativity of GTEx mCpGs in external cohorts.

Extended Data Fig. 5 |

Overlap of mCpGs identified in GTEx (FDR < 0.05) with mCpGs identified in external mQTL cohorts at different nominal p-value thresholds (P < 1e-03 and P < 1e-05). Results are represented for all mCpGs - detected in EPIC and/or 450 K Illumina array - and for 450 K Illumina array CpG sites exclusively. P-value thresholds correspond to external cohort nominal mQTL associations, derived from QTL mapping by multiple regression two-sided t-tests.