Table 1.
DRS metrics
| Time post-degradation treatment (h) | Average RIN | N50 (bp) | Median aligned length (bp) | Full-length transcripts (%) | Transcripts within 25 bp of 5′ and 50 bp of 3′ (%) | Median coverage fraction per read | Median coverage fraction per isoform | Number of genes detected per 1M reads | Number of isoforms detected per 1M reads |
|---|---|---|---|---|---|---|---|---|---|
| 0 (n = 3) | 9.8 | 1378 | 773 | 25 | 20 | 0.68 | 0.53 | 14 727 | 33 502 |
| 0.5 (n = 2) | 9.6 | 1460 | 774 | 24 | 19 | 0.67 | 0.52 | 14 849 | 34 387 |
| 1 (n = 2) | 9.3 | 1203 | 697 | 20 | 17 | 0.57 | 0.42 | 14 942 | 34 431 |
| 3–4 (n = 3) | 8.7 | 1009 | 628 | 19 | 17 | 0.53 | 0.38 | 14 733 | 35 164 |
| 6 (n = 3) | 8.2 | 925.6 | 607 | 20 | 18 | 0.53 | 0.35 | 14 663 | 34 043 |
| 8 (n = 2) | 7.25 | 777 | 518 | 16 | 16 | 0.47 | 0.29 | 14 459 | 33 806 |