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. 2000 Jan 15;28(2):e6. doi: 10.1093/nar/28.2.e6

Table 2. Branch migration during a yeast DNA extraction protocol using SDS.

Treatmenta Branch migration (%)b
  No addition + Co3+(NH3)6Cl3c
Spheroplasting 85 0
SDS lysis 85 68
Phenol:chloroform 73 50
Chloroform 0 n.d.
Isopropanol 0 0
Ethanol 0 0

n.d., not determined.

aAnnealed substrates were aliquoted into the following: spheroplasting buffer or SDS lysis buffer, and incubated at 37°C for 30 min; TNM buffer, and extracted with phenol:chloroform or chloroform; 0.3 M sodium acetate, and precipitated using isopropanol or ethanol.

bBranch migration using 300 bp substrates S1 and S2 was measured as in Figure 2.

cSolutions were supplemented with 10 mM Co3+(NH3)6Cl3 as indicated. Phenol, but not chloroform, was equilibrated with buffer containing 10 mM Co3+(NH3)6Cl3.