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Sequence-dependent analysis of propeller twist (a), roll angle (b), minor groove width (Pi–Pj+3 distance minus 5.8 Å) (c), in the 2:1 complex of H33258 with d(CTTTTGCAAAAG)2 (solid lines), and for the free DNA (dotted lines); error bars represent one standard deviation from the mean over the final 500 ps of the 1 ns dynamics simulation.
