Average non-beneficial synonymous fitness effect |
|
Uniform (0.1, 1) |
Average non-beneficial non-synonymous fitness effect |
|
Uniform (0.1, 1) |
Average beneficial fitness effect |
|
Uniform (1, 3) (Sanjuán, Moya, and Elena 2004) |
Beneficial synonymous SNV probability |
|
Uniform (0, 0.01) (Sanjuán, Moya, and Elena 2004) |
Beneficial non-synonymous SNV probability |
|
Uniform (0, 0.01) (Sanjuán, Moya, and Elena 2004) |
Average number of synonymous SNVs per genotype in the initial population |
|
Uniform (0.4, 0.6) |
Average number of non-synonymous SNVs per genotype in the initial population |
|
Uniform (0.7, 0.9) |
Initial log-fitness correlation |
|
Uniform (0, 2) |
Epistasis |
|
Uniform (−1, 3) |
Genome-wide mutation rate |
U
|
Log-Uniform (−4, 0.3) (Sanjuán 2010) |