Table 3.
List of genomic and coding loci (hg38) analysed in the study
| Gene | Transcript | Coding region | rsIDs |
|---|---|---|---|
| AMH | NM_000479.5 | c.*511A>G | rs10417628 |
| NM_000479.5 | c. 546G>A | ||
| NM_000479.5 | c. 555+50G>A | rs8112524 | |
| NM_000479.5 | c. 252G>A | rs61736572 | |
| NM_000479.5 | c. 303G>A | rs61736575 | |
| NM_000479.5 | c. 146G>T | rs10407022 | |
| AMHR2 | NM_020547.3 | c. 1288+29C>T | rs201217654 |
| NM_020547.3 | c. 1425+77A>G | rs11170555 | |
| NM_020547.3 | c. 622-6C>T | rs2071558 | |
| NM_020547.3 | c. 853-10G>A | rs3741664 | |
| NM_020547.3 | c. 425-29C>T | ||
| BMP15 | NM_005448.2 | c. 308A>G | rs41308602 |
| NM_005448.2 | c. 319C>A | ||
| NM_005448.2 | c. 329-74A>C | rs73488037 | |
| NM_005448.2 | c. 852C>T | rs17003221 | |
| NM_005448.2 | c.-9C>G | ||
| COMT | NM_001135161.2 | c. 472G>A | rs4680 |
| CYP19A1 | NM_001347255.2 | c. 240A>G | rs700518 |
| ESR 1 | NM_001122742.1 | c. 1782G>A | rs2228480 |
| NM_001122742.1 | c. 229G>A | rs9340773 | |
| NM_001122742.1 | c. 261G>C | rs746432 | |
| NM_001122742.1 | c. 30T>C | rs2077647 | |
| NM_001122742.1 | c. 453-397T>C | ||
| NM_001122742.1 | c. 729T>C | rs4986934 | |
| NM_001122742.1 | c. 975G>C | ||
| FSHR | NM_000145.3 | c. 152+152A>G | rs7589810 |
| NM_000145.3 | c. 2039G>A | rs6166 | |
| NM_000145.3 | c. 919G>A | rs6165 | |
| KISS1 | NM_002256.4 | c. 107A>G | rs35431622 |
| NM_002256.4 | c. 242C>G | rs4889 | |
| NM_002256.4 | c. 58G>A | rs12998 | |
| KISS1R | NM_032551.5 | c. 244+128C>T | |
| NM_032551.5 | c. 369+25A>G | ||
| NM_032551.5 | c. 369+34T>G | ||
| NM_032551.5 | c. 369+8C>G | ||
| LHB | NM_000894.2 | c.-34T>A | rs3752210 |
| NM_000894.2 | c. 285T>C | rs1056917 | |
| LHCGR | NM_000233.4 | c. 161+4386G>A | rs13431355 |
| NM_000233.4 | c. 161+4491T>C | rs13405728 | |
| MTHFR | NM_005957.4 | c. 665C>T | rs1801133 |
| SERPINE1 | NM_000602.4 | c. 1087+162C>T | rs2227692 |
| NM_000602.4 | c. 43G>A | rs6092 | |
| NM_000602.4 | c. 555G>C | rs201293550 | |
| NM_000602.4 | c. 701-45G>A | rs2227684 | |
| TNF | NM_000594.4 | c.-418G>A | rs361525 |
| VEGFA | NM_001025366.3 | c. 1085+52T>C | |
| NM_001025366.3 | c. 534C>T | rs25648 | |
| NM_001025366.3 | c. 659-111C>A | rs2146323 | |
| NM_001025366.3 | c. 659-99G>A | rs3024997 | |
| NM_001025366.3 | c. 856-28C>T | rs3025000 | |
| NM_001025366.3 | c. 963-112G>A | rs3025017 | |
| NM_001025366.3 | c. 963-119G>A | ||
| NM_001025366.3 | c. 1034+103T>C |
*Denotes that the position of the nucleotide mentioned is in the upstream region of AMH gene. This nomenclature is according to standard guidelines of nucleotide notation. AMH=Anti-Mullerian hormone, ESR1=Oestrogen receptor 1, FSHR=Follicle-stimulating hormone receptor