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. 2023 Jun 10;13(7):230. doi: 10.1007/s13205-023-03659-z

Table 3.

Estimated Ka/Ks ratios and divergence times of the duplicated CqGST genes

S no. Gene name 1 Chr no. Gene name 2 Chr no. Percent identity Ka Ks Ka/Ks Duplication time (Mya) Duplication type Selection type
1 CqGSTU1 Chr05 CqGSTU5 Chr05 89.43% 0.4158 0.7940 0.5236 26.46 Tandem Purifying
2 CqGSTU1 Chr05 CqGSTU58 Chr17 88.62% 0.4201 0.7123 0.5898 23.74 Segmental Purifying
3 CqGSTU2 Chr05 CqGSTU4 Chr05 93.59% 0.0316 0.1078 0.2932 3.593 Tandem Purifying
4 CqGSTU2 Chr05 CqGSTU57 Chr16 94.62% 0.0321 0.0972 0.3306 3.24 Segmental Purifying
5 CqGSTU5 Chr05 CqGSTU58 Chr17 92.04% 0.0381 0.1432 0.2663 4.77 Segmental Purifying
6 CqGSTU6 Chr05 CqGSTU59 Chr17 93% 0.5209 0.9775 0.5328 32.58 Segmental Purifying
7 CqGSTU8 Chr05 CqGSTU37 Chr11 90.48% 0.1207 0.1955 0.6178 6.51 Segmental Purifying
8 CqGSTU9 Chr06 CqGSTU44 Chr14 92.76% 0.0324 0.1090 0.2976 3.63 Segmental Purifying
9 CqGSTU10 Chr00 CqGSTU17 Chr07 100% 0.0000 0.0000 0.2035 0 Segmental Purifying
10 CqGSTU10 Chr00 CqGSTU35 Chr10 92.78% 0.0303 0.1070 0.2829 3.56 Segmental Purifying
11 CqGSTU12 Chr06 CqGSTU38 Chr12 93.79% 0.0785 0.1124 0.6981 3.74 Segmental Purifying
12 CqGSTU12 Chr06 CqGSTU41 Chr14 84.31% 0.1181 0.5356 0.2205 17.85 Segmental Purifying
13 CqGSTU13 Chr06 CqGSTU40 Chr14 92.80% 0.0418 0.1305 0.3204 4.35 Segmental Purifying
14 CqGSTU13 Chr06 CqGSTU41 Chr14 97.14% 0.0269 0.0848 0.3170 2.82 Segmental Purifying
15 CqGSTU14 Chr06 CqGSTU43 Chr14 91.67% 0.0386 0.1567 0.2462 5.22 Segmental Purifying
16 CqGSTU15 Chr06 CqGSTU39 Chr14 92.95% 0.0363 0.1519 0.2387 5.06 Segmental Purifying
17 CqGSTU17 Chr07 CqGSTU35 Chr10 95.96% 0.0190 0.0717 0.2653 2.39 Segmental Purifying
18 CqGSTU18 Chr07 CqGSTU36 Chr11 90.67% 0.0470 0.0334 1.4071 1.11 Segmental Positive
19 CqGSTU19 Chr07 CqGSTU63 Chr17 95.74% 0.0222 0.1866 0.1189 6.22 Segmental Purifying
20 CqGSTU20 Chr07 CqGSTU45 Chr14 92.98% 0.0350 0.0281 1.2486 0.93 Segmental Positive
21 CqGSTU20 Chr07 CqGSTU46 Chr15 94.58% 0.0255 0.0511 0.4987 1.7 Segmental Purifying
22 CqGSTU20 Chr07 CqGSTU48 Chr15 89.74% 0.3383 0.3252 1.0404 10.84 Segmental Positive
23 CqGSTU20 Chr07 CqGSTU64 Chr18 91.13% 0.0398 0.1847 0.2155 6.15 Segmental Purifying
24 CqGSTU20 Chr07 CqGSTU65 Chr18 87.19% 0.0704 0.0754 0.9331 2.51 Segmental Purifying
25 CqGSTU21 Chr07 CqGSTU62 Chr17 93.12% 0.0374 0.0907 0.4128 3.02 Segmental Purifying
26 CqGSTU22 Chr07 CqGSTU60 Chr17 92.91% 0.3185 0.8690 0.3665 28.97 Segmental Purifying
27 CqGSTU23 Chr07 CqGSTU24 Chr08 88.16% 0.0639 0.1998 0.3197 6.66 Segmental Purifying
28 CqGSTU23 Chr07 CqGSTU49 Chr15 87.50% 0.0788 0.2402 0.3281 8.01 Segmental Purifying
29 CqGSTU24 Chr08 CqGSTU49 Chr15 80.34% 0.0925 0.2220 0.4166 7.40 Segmental Purifying
30 CqGSTU27 Chr08 CqGSTU50 Chr16 88.74% 0.0492 0.1251 0.3934 4.17 Segmental Purifying
31 CqGSTU29 Chr08 CqGSTU52 Chr16 88.41% 0.0642 0.1255 0.5120 4.18 Segmental Purifying
32 CqGSTU30 Chr08 CqGSTU31 Chr08 84.48% 0.0841 0.2455 0.3426 8.18 Tandem Purifying
33 CqGSTU30 Chr08 CqGSTU53 Chr16 86.58% 0.0604 0.1497 0.4035 4.99 Segmental Purifying
34 CqGSTU30 Chr08 CqGSTU54 Chr16 82.13% 0.0943 0.3304 0.2853 11.01 Segmental Purifying
35 CqGSTU31 Chr08 CqGSTU53 Chr16 80.17% 0.0994 0.2779 0.3576 9.26 Segmental Purifying
36 CqGSTU31 Chr08 CqGSTU54 Chr16 92.34% 0.0333 0.1984 0.1677 6.61 Segmental Purifying
37 CqGSTU33 Chr10 CqGSTU34 Chr10 87.11% 0.0654 0.0611 1.0700 2.04 Tandem Positive
38 CqGSTU38 Chr12 CqGSTU41 Chr14 92.45% 0.2519 1.2935 0.1948 43.12 Segmental Purifying
39 CqGSTU45 Chr15 CqGSTU46 Chr15 96.49% 0.0192 0.0574 0.3342 1.91 Tandem Purifying
40 CqGSTU45 Chr15 CqGSTU47 Chr15 92.31% 0.5645 0.9946 0.5675 33.15 Tandem Purifying
41 CqGSTU45 Chr15 CqGSTU48 Chr15 93.86% 0.0365 0.0245 1.4908 0.82 Tandem Positive
42 CqGSTU45 Chr15 CqGSTU64 Chr18 91.23% 0.0427 0.1953 0.2184 6.51 Segmental Purifying
43 CqGSTU45 Chr15 CqGSTU65 Chr18 84.21% 0.0989 0.1047 0.9445 3.49 Segmental Purifying
44 CqGSTU46 Chr15 CqGSTU64 Chr18 90.64% 0.0409 0.2245 0.1822 7.48 Segmental Purifying
45 CqGSTU46 Chr15 CqGSTU65 Chr18 86.21% 0.0719 0.1264 0.5691 4.21 Segmental Purifying
46 CqGSTU46 Chr15 CqGSTU48 Chr15 91.45% 0.3091 0.3581 0.8631 11.94 Tandem Purifying
47 CqGSTU47 Chr15 CqGSTU48 Chr15 97.87% 0.5602 0.7139 0.7847 23.80 Tandem Purifying
48 CqGSTU48 Chr15 CqGSTU64 Chr18 88.03% 0.3132 0.6329 0.4949 21.10 Segmental Purifying
49 CqGSTU48 Chr15 CqGSTU65 Chr18 81.20% 0.3798 0.4596 0.8264 15.32 Segmental Purifying
50 CqGSTU55 Chr16 CqGSTU56 Chr16 89.04% 0.0852 0.1898 0.4486 6.33 Tandem Purifying
51 CqGSTF2 Chr07 CqGSTF16 Chr17 96.26% 0.0175 0.0888 0.1973 2.96 Segmental Purifying
52 CqGSTF3 Chr07 CqGSTF4 Chr07 91.39% 0.2246 0.3272 0.6866 10.91 Tandem Purifying
53 CqGSTF3 Chr07 CqGSTF17 Chr17 90.07% 0.2242 0.3650 0.6142 12.17 Segmental Purifying
54 CqGSTF4 Chr07 CqGSTF17 Chr17 97.67% 0.0115 0.1161 0.0991 3.87 Segmental Purifying
55 CqGSTF5 Chr07 CqGSTF7 Chr07 88.43% 0.0780 0.1430 0.5455 4.77 Tandem Purifying
56 CqGSTF5 Chr07 CqGSTF14 Chr17 93.64% 0.1004 0.2293 0.4378 7.64 Segmental Purifying
57 CqGSTF6 Chr07 CqGSTF8 Chr07 95.92% 0.0314 0.0452 0.6948 1.51 Tandem Purifying
58 CqGSTF6 Chr07 CqGSTF19 Chr17 85.71% 0.0955 0.1053 0.9065 3.51 Segmental Purifying
59 CqGSTF7 Chr07 CqGSTF14 Chr17 87.04% 0.0618 0.1391 0.4444 4.64 Segmental Purifying
60 CqGSTF8 Chr07 CqGSTF19 Chr17 83.87% 0.0887 0.1014 0.8748 3.38 Segmental Purifying
61 CqGSTF9 Chr07 CqGSTF13 Chr17 96.28% 0.0170 0.1201 0.1411 4.00 Segmental Purifying
62 CqGSTF10 Chr07 CqGSTF12 Chr17 91.37% 0.0515 0.1630 0.3159 5.43 Segmental Purifying
63 CqGSTT2 Chr13 CqGSTT3 Chr16 80.69% 0.1201 0.3129 0.3837 10.43 Segmental Purifying
64 CqGSTZ2 Chr10 CqGSTZ4 Chr01 95.09% 0.0176 0.1252 0.1410 4.17 Segmental Purifying
65 CqGSTDHAR1 Chr04 CqGSTDHAR2 Chr01 81.13% 0.0075 0.1168 0.0643 3.89 Segmental Purifying
66 CqGSTH1 Chr16 CqGSTH2 Chr08 92.42% 0.0135 0.0597 0.2262 1.99 Segmental Purifying
67 CqGSTH3 Chr14 CqGSTH4 Chr06 98.56% 0.0071 0.0587 0.1216 1.96 Segmental Purifying
68 CqGSTM1 Chr01 CqGSTM2 Chr01 85.20% 0.0111 0.0750 0.1474 2.50 Tandem Purifying
69 CqGSTMi1 Chr15 CqGSTMi5 Chr17 83.52% 0.0301 0.1066 0.2829 3.55 Segmental Purifying
70 CqGSTMi2 Chr00 CqGSTMi3 Chr10 84.13% 0.0171 0.0695 0.2463 2.32 Segmental Purifying
71 CqGSTMi4 Chr12 CqGSTMi6 Chr05 92.76% 0.0324 0.0646 0.5008 2.15 Segmental Purifying
72 CqGSTEF1B1 Chr03 CqGSTEF1B2 Chr10 82.74% 0.0917 0.7587 0.1209 25.29 Segmental Purifying
73 CqGSTEF1B1 Chr03 CqGSTEF1B3 Chr10 83.63% 0.0851 0.8136 0.1046 27.12 Segmental Purifying
74 CqGSTEF1B1 Chr03 CqGSTEF1B4 Chr03 84.07% 0.0828 0.8725 0.0949 29.08 Tandem Purifying
75 CqGSTEF1B1 Chr03 CqGSTEF1B5 Chr03 83.63% 0.0847 0.8571 0.0988 28.57 Tandem Purifying
76 CqGSTEF1B1 Chr03 CqGSTEF1B6 Chr10 99.19% 0.0036 0.1574 0.0232 5.25 Segmental Purifying
77 CqGSTEF1B1 Chr03 CqGSTEF1B7 Chr10 97.00% 0.1271 0.2749 0.4622 9.16 Segmental Purifying
78 CqGSTEF1B2 Chr10 CqGSTEF1B3 Chr10 90.41% 0.0490 0.2030 0.2414 6.77 Tandem Purifying
79 CqGSTEF1B2 Chr10 CqGSTEF1B4 Chr03 91.61% 0.0437 0.2507 0.1743 8.36 Segmental Purifying
80 CqGSTEF1B2 Chr10 CqGSTEF1B5 Chr03 90.41% 0.0473 0.2175 0.2175 7.25 Segmental Purifying
81 CqGSTEF1B2 Chr10 CqGSTEF1B6 Chr10 91.06% 0.0407 0.6499 0.0626 21.66 Tandem Purifying
82 CqGSTEF1B3 Chr10 CqGSTEF1B4 Chr03 98.56% 0.0066 0.1303 0.0503 4.34 Segmental Purifying
83 CqGSTEF1B3 Chr10 CqGSTEF1B5 Chr03 96.40% 0.0188 0.1438 0.1306 4.79 Segmental Purifying
84 CqGSTEF1B3 Chr10 CqGSTEF1B6 Chr10 92.68% 0.0328 0.7165 0.0457 23.88 Tandem Purifying
85 CqGSTEF1B4 Chr03 CqGSTEF1B5 Chr03 96.16% 0.0186 0.1663 0.1120 5.54 Tandem Purifying
86 CqGSTEF1B4 Chr03 CqGSTEF1B6 Chr10 92.62% 0.0322 0.7986 0.0404 26.62 Segmental Purifying
87 CqGSTEF1B5 Chr03 CqGSTEF1B6 Chr10 92.68% 0.0328 0.6440 0.0510 21.47 Segmental Purifying
88 CqGSTGHR1 Chr01 CqGSTGHR2 Chr01 84.66% 0.0884 0.4827 0.1832 16.09 Tandem Purifying
89 CqGSTGHR1 Chr01 CqGSTGHR3 Chr02 83.44% 0.0998 0.4451 0.2241 14.84 Segmental Purifying
90 CqGSTGHR1 Chr01 CqGSTGHR4 Chr02 84.05% 0.0413 0.0960 0.4302 3.20 Segmental Purifying
91 CqGSTGHR2 Chr01 CqGSTGHR3 Chr02 95.42% 0.0232 0.0416 0.5579 1.39 Segmental Purifying
92 CqGSTGHR5 Chr17 CqGSTGHR6 Chr07 97.07% 0.0130 0.0556 0.2346 1.85 Segmental Purifying