Table 3.
Estimated Ka/Ks ratios and divergence times of the duplicated CqGST genes
| S no. | Gene name 1 | Chr no. | Gene name 2 | Chr no. | Percent identity | Ka | Ks | Ka/Ks | Duplication time (Mya) | Duplication type | Selection type |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CqGSTU1 | Chr05 | CqGSTU5 | Chr05 | 89.43% | 0.4158 | 0.7940 | 0.5236 | 26.46 | Tandem | Purifying |
| 2 | CqGSTU1 | Chr05 | CqGSTU58 | Chr17 | 88.62% | 0.4201 | 0.7123 | 0.5898 | 23.74 | Segmental | Purifying |
| 3 | CqGSTU2 | Chr05 | CqGSTU4 | Chr05 | 93.59% | 0.0316 | 0.1078 | 0.2932 | 3.593 | Tandem | Purifying |
| 4 | CqGSTU2 | Chr05 | CqGSTU57 | Chr16 | 94.62% | 0.0321 | 0.0972 | 0.3306 | 3.24 | Segmental | Purifying |
| 5 | CqGSTU5 | Chr05 | CqGSTU58 | Chr17 | 92.04% | 0.0381 | 0.1432 | 0.2663 | 4.77 | Segmental | Purifying |
| 6 | CqGSTU6 | Chr05 | CqGSTU59 | Chr17 | 93% | 0.5209 | 0.9775 | 0.5328 | 32.58 | Segmental | Purifying |
| 7 | CqGSTU8 | Chr05 | CqGSTU37 | Chr11 | 90.48% | 0.1207 | 0.1955 | 0.6178 | 6.51 | Segmental | Purifying |
| 8 | CqGSTU9 | Chr06 | CqGSTU44 | Chr14 | 92.76% | 0.0324 | 0.1090 | 0.2976 | 3.63 | Segmental | Purifying |
| 9 | CqGSTU10 | Chr00 | CqGSTU17 | Chr07 | 100% | 0.0000 | 0.0000 | 0.2035 | 0 | Segmental | Purifying |
| 10 | CqGSTU10 | Chr00 | CqGSTU35 | Chr10 | 92.78% | 0.0303 | 0.1070 | 0.2829 | 3.56 | Segmental | Purifying |
| 11 | CqGSTU12 | Chr06 | CqGSTU38 | Chr12 | 93.79% | 0.0785 | 0.1124 | 0.6981 | 3.74 | Segmental | Purifying |
| 12 | CqGSTU12 | Chr06 | CqGSTU41 | Chr14 | 84.31% | 0.1181 | 0.5356 | 0.2205 | 17.85 | Segmental | Purifying |
| 13 | CqGSTU13 | Chr06 | CqGSTU40 | Chr14 | 92.80% | 0.0418 | 0.1305 | 0.3204 | 4.35 | Segmental | Purifying |
| 14 | CqGSTU13 | Chr06 | CqGSTU41 | Chr14 | 97.14% | 0.0269 | 0.0848 | 0.3170 | 2.82 | Segmental | Purifying |
| 15 | CqGSTU14 | Chr06 | CqGSTU43 | Chr14 | 91.67% | 0.0386 | 0.1567 | 0.2462 | 5.22 | Segmental | Purifying |
| 16 | CqGSTU15 | Chr06 | CqGSTU39 | Chr14 | 92.95% | 0.0363 | 0.1519 | 0.2387 | 5.06 | Segmental | Purifying |
| 17 | CqGSTU17 | Chr07 | CqGSTU35 | Chr10 | 95.96% | 0.0190 | 0.0717 | 0.2653 | 2.39 | Segmental | Purifying |
| 18 | CqGSTU18 | Chr07 | CqGSTU36 | Chr11 | 90.67% | 0.0470 | 0.0334 | 1.4071 | 1.11 | Segmental | Positive |
| 19 | CqGSTU19 | Chr07 | CqGSTU63 | Chr17 | 95.74% | 0.0222 | 0.1866 | 0.1189 | 6.22 | Segmental | Purifying |
| 20 | CqGSTU20 | Chr07 | CqGSTU45 | Chr14 | 92.98% | 0.0350 | 0.0281 | 1.2486 | 0.93 | Segmental | Positive |
| 21 | CqGSTU20 | Chr07 | CqGSTU46 | Chr15 | 94.58% | 0.0255 | 0.0511 | 0.4987 | 1.7 | Segmental | Purifying |
| 22 | CqGSTU20 | Chr07 | CqGSTU48 | Chr15 | 89.74% | 0.3383 | 0.3252 | 1.0404 | 10.84 | Segmental | Positive |
| 23 | CqGSTU20 | Chr07 | CqGSTU64 | Chr18 | 91.13% | 0.0398 | 0.1847 | 0.2155 | 6.15 | Segmental | Purifying |
| 24 | CqGSTU20 | Chr07 | CqGSTU65 | Chr18 | 87.19% | 0.0704 | 0.0754 | 0.9331 | 2.51 | Segmental | Purifying |
| 25 | CqGSTU21 | Chr07 | CqGSTU62 | Chr17 | 93.12% | 0.0374 | 0.0907 | 0.4128 | 3.02 | Segmental | Purifying |
| 26 | CqGSTU22 | Chr07 | CqGSTU60 | Chr17 | 92.91% | 0.3185 | 0.8690 | 0.3665 | 28.97 | Segmental | Purifying |
| 27 | CqGSTU23 | Chr07 | CqGSTU24 | Chr08 | 88.16% | 0.0639 | 0.1998 | 0.3197 | 6.66 | Segmental | Purifying |
| 28 | CqGSTU23 | Chr07 | CqGSTU49 | Chr15 | 87.50% | 0.0788 | 0.2402 | 0.3281 | 8.01 | Segmental | Purifying |
| 29 | CqGSTU24 | Chr08 | CqGSTU49 | Chr15 | 80.34% | 0.0925 | 0.2220 | 0.4166 | 7.40 | Segmental | Purifying |
| 30 | CqGSTU27 | Chr08 | CqGSTU50 | Chr16 | 88.74% | 0.0492 | 0.1251 | 0.3934 | 4.17 | Segmental | Purifying |
| 31 | CqGSTU29 | Chr08 | CqGSTU52 | Chr16 | 88.41% | 0.0642 | 0.1255 | 0.5120 | 4.18 | Segmental | Purifying |
| 32 | CqGSTU30 | Chr08 | CqGSTU31 | Chr08 | 84.48% | 0.0841 | 0.2455 | 0.3426 | 8.18 | Tandem | Purifying |
| 33 | CqGSTU30 | Chr08 | CqGSTU53 | Chr16 | 86.58% | 0.0604 | 0.1497 | 0.4035 | 4.99 | Segmental | Purifying |
| 34 | CqGSTU30 | Chr08 | CqGSTU54 | Chr16 | 82.13% | 0.0943 | 0.3304 | 0.2853 | 11.01 | Segmental | Purifying |
| 35 | CqGSTU31 | Chr08 | CqGSTU53 | Chr16 | 80.17% | 0.0994 | 0.2779 | 0.3576 | 9.26 | Segmental | Purifying |
| 36 | CqGSTU31 | Chr08 | CqGSTU54 | Chr16 | 92.34% | 0.0333 | 0.1984 | 0.1677 | 6.61 | Segmental | Purifying |
| 37 | CqGSTU33 | Chr10 | CqGSTU34 | Chr10 | 87.11% | 0.0654 | 0.0611 | 1.0700 | 2.04 | Tandem | Positive |
| 38 | CqGSTU38 | Chr12 | CqGSTU41 | Chr14 | 92.45% | 0.2519 | 1.2935 | 0.1948 | 43.12 | Segmental | Purifying |
| 39 | CqGSTU45 | Chr15 | CqGSTU46 | Chr15 | 96.49% | 0.0192 | 0.0574 | 0.3342 | 1.91 | Tandem | Purifying |
| 40 | CqGSTU45 | Chr15 | CqGSTU47 | Chr15 | 92.31% | 0.5645 | 0.9946 | 0.5675 | 33.15 | Tandem | Purifying |
| 41 | CqGSTU45 | Chr15 | CqGSTU48 | Chr15 | 93.86% | 0.0365 | 0.0245 | 1.4908 | 0.82 | Tandem | Positive |
| 42 | CqGSTU45 | Chr15 | CqGSTU64 | Chr18 | 91.23% | 0.0427 | 0.1953 | 0.2184 | 6.51 | Segmental | Purifying |
| 43 | CqGSTU45 | Chr15 | CqGSTU65 | Chr18 | 84.21% | 0.0989 | 0.1047 | 0.9445 | 3.49 | Segmental | Purifying |
| 44 | CqGSTU46 | Chr15 | CqGSTU64 | Chr18 | 90.64% | 0.0409 | 0.2245 | 0.1822 | 7.48 | Segmental | Purifying |
| 45 | CqGSTU46 | Chr15 | CqGSTU65 | Chr18 | 86.21% | 0.0719 | 0.1264 | 0.5691 | 4.21 | Segmental | Purifying |
| 46 | CqGSTU46 | Chr15 | CqGSTU48 | Chr15 | 91.45% | 0.3091 | 0.3581 | 0.8631 | 11.94 | Tandem | Purifying |
| 47 | CqGSTU47 | Chr15 | CqGSTU48 | Chr15 | 97.87% | 0.5602 | 0.7139 | 0.7847 | 23.80 | Tandem | Purifying |
| 48 | CqGSTU48 | Chr15 | CqGSTU64 | Chr18 | 88.03% | 0.3132 | 0.6329 | 0.4949 | 21.10 | Segmental | Purifying |
| 49 | CqGSTU48 | Chr15 | CqGSTU65 | Chr18 | 81.20% | 0.3798 | 0.4596 | 0.8264 | 15.32 | Segmental | Purifying |
| 50 | CqGSTU55 | Chr16 | CqGSTU56 | Chr16 | 89.04% | 0.0852 | 0.1898 | 0.4486 | 6.33 | Tandem | Purifying |
| 51 | CqGSTF2 | Chr07 | CqGSTF16 | Chr17 | 96.26% | 0.0175 | 0.0888 | 0.1973 | 2.96 | Segmental | Purifying |
| 52 | CqGSTF3 | Chr07 | CqGSTF4 | Chr07 | 91.39% | 0.2246 | 0.3272 | 0.6866 | 10.91 | Tandem | Purifying |
| 53 | CqGSTF3 | Chr07 | CqGSTF17 | Chr17 | 90.07% | 0.2242 | 0.3650 | 0.6142 | 12.17 | Segmental | Purifying |
| 54 | CqGSTF4 | Chr07 | CqGSTF17 | Chr17 | 97.67% | 0.0115 | 0.1161 | 0.0991 | 3.87 | Segmental | Purifying |
| 55 | CqGSTF5 | Chr07 | CqGSTF7 | Chr07 | 88.43% | 0.0780 | 0.1430 | 0.5455 | 4.77 | Tandem | Purifying |
| 56 | CqGSTF5 | Chr07 | CqGSTF14 | Chr17 | 93.64% | 0.1004 | 0.2293 | 0.4378 | 7.64 | Segmental | Purifying |
| 57 | CqGSTF6 | Chr07 | CqGSTF8 | Chr07 | 95.92% | 0.0314 | 0.0452 | 0.6948 | 1.51 | Tandem | Purifying |
| 58 | CqGSTF6 | Chr07 | CqGSTF19 | Chr17 | 85.71% | 0.0955 | 0.1053 | 0.9065 | 3.51 | Segmental | Purifying |
| 59 | CqGSTF7 | Chr07 | CqGSTF14 | Chr17 | 87.04% | 0.0618 | 0.1391 | 0.4444 | 4.64 | Segmental | Purifying |
| 60 | CqGSTF8 | Chr07 | CqGSTF19 | Chr17 | 83.87% | 0.0887 | 0.1014 | 0.8748 | 3.38 | Segmental | Purifying |
| 61 | CqGSTF9 | Chr07 | CqGSTF13 | Chr17 | 96.28% | 0.0170 | 0.1201 | 0.1411 | 4.00 | Segmental | Purifying |
| 62 | CqGSTF10 | Chr07 | CqGSTF12 | Chr17 | 91.37% | 0.0515 | 0.1630 | 0.3159 | 5.43 | Segmental | Purifying |
| 63 | CqGSTT2 | Chr13 | CqGSTT3 | Chr16 | 80.69% | 0.1201 | 0.3129 | 0.3837 | 10.43 | Segmental | Purifying |
| 64 | CqGSTZ2 | Chr10 | CqGSTZ4 | Chr01 | 95.09% | 0.0176 | 0.1252 | 0.1410 | 4.17 | Segmental | Purifying |
| 65 | CqGSTDHAR1 | Chr04 | CqGSTDHAR2 | Chr01 | 81.13% | 0.0075 | 0.1168 | 0.0643 | 3.89 | Segmental | Purifying |
| 66 | CqGSTH1 | Chr16 | CqGSTH2 | Chr08 | 92.42% | 0.0135 | 0.0597 | 0.2262 | 1.99 | Segmental | Purifying |
| 67 | CqGSTH3 | Chr14 | CqGSTH4 | Chr06 | 98.56% | 0.0071 | 0.0587 | 0.1216 | 1.96 | Segmental | Purifying |
| 68 | CqGSTM1 | Chr01 | CqGSTM2 | Chr01 | 85.20% | 0.0111 | 0.0750 | 0.1474 | 2.50 | Tandem | Purifying |
| 69 | CqGSTMi1 | Chr15 | CqGSTMi5 | Chr17 | 83.52% | 0.0301 | 0.1066 | 0.2829 | 3.55 | Segmental | Purifying |
| 70 | CqGSTMi2 | Chr00 | CqGSTMi3 | Chr10 | 84.13% | 0.0171 | 0.0695 | 0.2463 | 2.32 | Segmental | Purifying |
| 71 | CqGSTMi4 | Chr12 | CqGSTMi6 | Chr05 | 92.76% | 0.0324 | 0.0646 | 0.5008 | 2.15 | Segmental | Purifying |
| 72 | CqGSTEF1B1 | Chr03 | CqGSTEF1B2 | Chr10 | 82.74% | 0.0917 | 0.7587 | 0.1209 | 25.29 | Segmental | Purifying |
| 73 | CqGSTEF1B1 | Chr03 | CqGSTEF1B3 | Chr10 | 83.63% | 0.0851 | 0.8136 | 0.1046 | 27.12 | Segmental | Purifying |
| 74 | CqGSTEF1B1 | Chr03 | CqGSTEF1B4 | Chr03 | 84.07% | 0.0828 | 0.8725 | 0.0949 | 29.08 | Tandem | Purifying |
| 75 | CqGSTEF1B1 | Chr03 | CqGSTEF1B5 | Chr03 | 83.63% | 0.0847 | 0.8571 | 0.0988 | 28.57 | Tandem | Purifying |
| 76 | CqGSTEF1B1 | Chr03 | CqGSTEF1B6 | Chr10 | 99.19% | 0.0036 | 0.1574 | 0.0232 | 5.25 | Segmental | Purifying |
| 77 | CqGSTEF1B1 | Chr03 | CqGSTEF1B7 | Chr10 | 97.00% | 0.1271 | 0.2749 | 0.4622 | 9.16 | Segmental | Purifying |
| 78 | CqGSTEF1B2 | Chr10 | CqGSTEF1B3 | Chr10 | 90.41% | 0.0490 | 0.2030 | 0.2414 | 6.77 | Tandem | Purifying |
| 79 | CqGSTEF1B2 | Chr10 | CqGSTEF1B4 | Chr03 | 91.61% | 0.0437 | 0.2507 | 0.1743 | 8.36 | Segmental | Purifying |
| 80 | CqGSTEF1B2 | Chr10 | CqGSTEF1B5 | Chr03 | 90.41% | 0.0473 | 0.2175 | 0.2175 | 7.25 | Segmental | Purifying |
| 81 | CqGSTEF1B2 | Chr10 | CqGSTEF1B6 | Chr10 | 91.06% | 0.0407 | 0.6499 | 0.0626 | 21.66 | Tandem | Purifying |
| 82 | CqGSTEF1B3 | Chr10 | CqGSTEF1B4 | Chr03 | 98.56% | 0.0066 | 0.1303 | 0.0503 | 4.34 | Segmental | Purifying |
| 83 | CqGSTEF1B3 | Chr10 | CqGSTEF1B5 | Chr03 | 96.40% | 0.0188 | 0.1438 | 0.1306 | 4.79 | Segmental | Purifying |
| 84 | CqGSTEF1B3 | Chr10 | CqGSTEF1B6 | Chr10 | 92.68% | 0.0328 | 0.7165 | 0.0457 | 23.88 | Tandem | Purifying |
| 85 | CqGSTEF1B4 | Chr03 | CqGSTEF1B5 | Chr03 | 96.16% | 0.0186 | 0.1663 | 0.1120 | 5.54 | Tandem | Purifying |
| 86 | CqGSTEF1B4 | Chr03 | CqGSTEF1B6 | Chr10 | 92.62% | 0.0322 | 0.7986 | 0.0404 | 26.62 | Segmental | Purifying |
| 87 | CqGSTEF1B5 | Chr03 | CqGSTEF1B6 | Chr10 | 92.68% | 0.0328 | 0.6440 | 0.0510 | 21.47 | Segmental | Purifying |
| 88 | CqGSTGHR1 | Chr01 | CqGSTGHR2 | Chr01 | 84.66% | 0.0884 | 0.4827 | 0.1832 | 16.09 | Tandem | Purifying |
| 89 | CqGSTGHR1 | Chr01 | CqGSTGHR3 | Chr02 | 83.44% | 0.0998 | 0.4451 | 0.2241 | 14.84 | Segmental | Purifying |
| 90 | CqGSTGHR1 | Chr01 | CqGSTGHR4 | Chr02 | 84.05% | 0.0413 | 0.0960 | 0.4302 | 3.20 | Segmental | Purifying |
| 91 | CqGSTGHR2 | Chr01 | CqGSTGHR3 | Chr02 | 95.42% | 0.0232 | 0.0416 | 0.5579 | 1.39 | Segmental | Purifying |
| 92 | CqGSTGHR5 | Chr17 | CqGSTGHR6 | Chr07 | 97.07% | 0.0130 | 0.0556 | 0.2346 | 1.85 | Segmental | Purifying |