Table 2. In Vitro Activity of Selected Compoundsa.
compound | EC50 hPPARα (μM ± SEM)b | hill slope | maximal relative activation of hPPARβ/δ (% ± SEM)c,e | maximal relative activation of hPPARγ (% ± SEM)d,e | clogPf | ligand efficiencyg |
---|---|---|---|---|---|---|
A229 (6l) | 0.59 ± 0.051 | 1.4 | 12.1 ± 1.0 | 11.2 ± 3.0 | 4.8 | 0.341 |
3g | 0.083 ± 0.011 | 2.2 | 31.1 ± 1.0 | 22.5 ± 6.7 | 5.4 | 0.347 |
6d | 0.080 ± 0.032 | 1.0 | 25.1 ± 4.1 | 35.7 ± 4.2 | 5.7 | 0.343 |
6j | 0.064 ± 0.018 | 1.8 | 6.1 ± 3.6 | 9.3 ± 2.3 | 5.7 | 0.337 |
8b | 0.30 ± 0.096 | 1.5 | 21.1 ± 6.2 | 19.9 ± 10.3 | 4.6 | 0.317 |
GW7647 | 0.0057 ± 0.00029 | 1.8 | N.D. | N.D. | 7.0 | 0.340 |
EC50 values and maximal relative activation were calculated as mean ± SEM of at least two independent experiments performed in triplicate.
Full dose–response curves are shown in the Supporting Information (Figure S9).
Maximal relative activation of hPPARβ/δ refers to the activity of known PPARβ/δ agonist GW0742 at 0.0075 μM concentration, which was defined as 100% activation.
Maximal relative activation of hPPARγ refers to the activity of known PPARγ agonist rosiglitazone at 2.5 μM concentration, which was defined as 100% activation.
For PPARβ/δ and PPARγ assays, a six-point dose–response range was completed for each compound ranging from 13 nM to 100 μM (13 nM, 77 nM, 463 nM, 3 μM, 17 μM, and 100 μM). Because of observed cytotoxicity at 100 μM for several compounds, the agonism level at 17 μM was selected as the point of comparison. N.D. = not determined.
Calculated logP (clogP) values were predicted using ADMETlab 2.0.19
Ligand efficiency (LE) values were calculated using the equation: LE = (1.37/the number of heavy atoms) × pEC50.20