Table 2.
Performance metrics of the deep learning model on multi-modal MRI for glioma grading and molecular subtyping
| Tasks | Modality | Accuracy | Sensitivity | Specificity | PPV | NPV | F1-score |
|---|---|---|---|---|---|---|---|
| OGG/GBM | A + B | 0.80 ± 0.07 | 0.76 ± 0.16 | 0.87 ± 0.16 | 0.91 ± 0.11 | 0.67 ± 0.05 | 0.78 ± 0.09 |
| A + C | 0.83 ± 0.11 | 0.90 ± 0.12 | 0.73 ± 0.25 | 0.82 ± 0.15 | 0.82 ± 0.15 | 0.77 ± 0.17 | |
| B + C | 0.77 ± 0.07 | 0.80 ± 0.19 | 0.73 ± 0.25 | 0.84 ± 0.13 | 0.74 ± 0.14 | 0.71 ± 0.12 | |
| A + B + C | 0.89 ± 0.11 | 0.90 ± 0.12 | 0.87 ± 0.16 | 0.91 ± 0.11 | 0.82 ± 0.15 | 0.87 ± 0.11 | |
| LGG/HGG | A + B | 0.77 ± 0.11 | 0.71 ± 0.19 | 0.87 ± 0.16 | 0.89 ± 0.14 | 0.64 ± 0.08 | 0.76 ± 0.12 |
| A + C | 0.74 ± 0.14 | 0.76 ± 0.16 | 0.73 ± 0.25 | 0.81 ± 0.17 | 0.62 ± 0.10 | 0.72 ± 0.17 | |
| B + C | 0.83 ± 0.11 | 0.86 ± 0.20 | 0.80 ± 0.27 | 0.89 ± 0.14 | 0.79 ± 0.18 | 0.77 ± 0.17 | |
| A + B + C | 0.86 ± 0.09 | 0.91 ± 0.11 | 0.80 ± 0.27 | 0.89 ± 0.14 | 0.82 ± 0.15 | 0.81 ± 0.17 | |
| IDH1(+)/(−) | A + B | 0.69 ± 0.11 | 0.75 ± 0.22 | 0.60 ± 0.25 | 0.75 ± 0.14 | 0.65 ± 0.18 | 0.60 ± 0.12 |
| A + C | 0.80 ± 0.07 | 0.86 ± 0.12 | 0.73 ± 0.25 | 0.84 ± 0.14 | 0.75 ± 0.13 | 0.75 ± 0.14 | |
| B + C | 0.80 ± 0.07 | 0.81 ± 0.19 | 0.80 ± 0.27 | 0.84 ± 0.13 | 0.74 ± 0.14 | 0.74 ± 0.14 | |
| A + B + C | 0.89 ± 0.11 | 0.81 ± 0.19 | 1.00 ± 0.00 | 1.00 ± 0.00 | 0.80 ± 0.17 | 0.85 ± 0.14 | |
| ATRX(−)/(+) | A + B | 0.51 ± 0.15 | 0.55 ± 0.19 | 0.47 ± 0.16 | 0.57 ± 0.14 | 0.45 ± 0.15 | 0.48 ± 0.14 |
| A + C | 0.66 ± 0.15 | 0.65 ± 0.20 | 0.67 ± 0.30 | 0.72 ± 0.16 | 0.62 ± 0.22 | 0.60 ± 0.16 | |
| B + C | 0.63 ± 0.15 | 0.60 ± 0.12 | 0.67 ± 0.30 | 0.75 ± 0.21 | 0.54 ± 0.14 | 0.59 ± 0.16 | |
| A + B + C | 0.71 ± 0.13 | 0.70 ± 0.19 | 0.73 ± 0.25 | 0.81 ± 0.17 | 0.60 ± 0.10 | 0.67 ± 0.15 |
A T2 FLAIR, B T1WI + C, C QSM, OGG other grade glioma (grade II + III), GBM glioblastoma multiforme (grade IV), LGG low-grade glioma (grade II), HGG high-grade glioma (grade III + IV), IDH1(+) IDH1 mutation, IDH1(−) IDH1 wildtype, ATRX(−) ATRX expression loss, ATRX(+) ATRX retention, PPV positive predictive value, NPV negative predictive value
The best results are marked in bold