Table 4.
Statistics of the SNP and Indel
Sample | Total SNP | Homozygosis SNP | Heterozygosis SNP | Total Indel | Homozygosis Indel | Heterozygosis Indel |
---|---|---|---|---|---|---|
TV-THS1-G49 | 1,257 | 251 | 1,006 | 536 | 254 | 282 |
TV-THS1-G50 | 1,359 | 287 | 1,072 | 591 | 278 | 313 |
TV-THS1-G51 | 1,420 | 296 | 1,124 | 577 | 304 | 273 |
Average | 1,345 | 278 | 1,067 | 568 | 279 | 289 |
TV-THS1-G49-MTZ | 1,326 | 279 | 1,047 | 1,729 | 205 | 1,524 |
TV-THS1-G50-MTZ | 1,426 | 283 | 1,143 | 2,036 | 217 | 1,819 |
TV-THS1-G51-MTZ | 1,694 | 300 | 1,394 | 2,718 | 245 | 2,473 |
Average | 1,482 | 287 | 1,195 | 2,161 | 222 | 1,939 |